| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2678 |
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| Symbol | |
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| ID | 3910471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3059834 |
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| End bp | 3061093 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884578 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_486291 |
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| Protein GI | 86749795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.372535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTGT TCACCGACTT GCCGACCATC CGATCGCGCC GCCGCCTGCC GCGCTGGCGC
GCGCTGTTGG TCGGCCTGCT GGTCATGACG ATCGGATCGA ACCAGGCGTT GGCTGCGAAC
CAGAGCGTGC AGGGCGCCAA GAAGGAAGAC GTCGCCGGCG GCTACGACAC CGATGCGCCG
AGCGCCATCC TGATCGACGG TGAAAGCGGC AGCGTGCTGT TCGAGAAGAA CGCCGACGAA
TTGCGCGCGC CGTCGAGCAT GCTGAAGCTG ATGACCGTGG AGCTGGTGTT TCACCTGCTG
GCCAAGGGTG AGATCAAGCC GACCGACGAG TACAAGATCA GCGAATACGC ATGGCGCCGC
GGCGGCGCGC CGGCCGGCAA CTCGACGATG TTCGCCGAAA TTCACAGCAA GGTCGCGGTG
GAGGACCTGC TCAAGGGCGC GATCATCCAG AGCGGCAACG ATTCCTGCAT CGCGCTGGCC
GAAGGCATCG CCGGCAGCGA GCCGGCATTC GTCGAGCGGA TGACCAAGCG GGCGCGTGAG
ATCGGGCTGA CGCAATCGAC CTTCGCGAAT TCCAACGGTC TGCCCGATCC CGGCAACAAG
ATGAGCGTGC GCGAACTCGG CCGGCTCGCG CGCCACATCA TCCAGACCTA TCCGAACGAC
TACAAGCTGT TCAGTGAGAA GGAATTCACC TGGAACAAGA TCCGGCAGAC CAACCGCAAC
CCGCTGCTGA ATACGTTCAA CGGCGCCGAC GGGTTGAAGA CCGGCTACAC CAAGGACGGC
GGCTACGGCA TGGTCGGCTC TGCGGTGCAG AACGGGATGC GGCTGATCGT GGTGGTCAAC
GGGATCGACG ACATCGACGA TCGAGCCAGC GAGGTCAAGA AGCTGCTGGA ATGGGGCTTC
CGCAACTTCG AATCGCGCGC GCTGTTCGCT TCGGACGCGA CGATCGGCTA TGCGCGGGTG
TTCGGCGGTG AGAAGCGTTA CGTCCCGTTG ATCCCGGCCG AGCCGGTGCG GGTGATGGTG
CGCAAGAACG GCAGCGACCG GCTGATCGCG CGGATCGTGT ATACCGGCCC GGTCGCAGCG
CCGGTCGACG CCGGCCGCCG CATCGGCGTG GTGCGGGTGT GGCGCGGCCC CAACCTTGCG
GTCGAAGTGC CGCTGCAGGC GGCCGAGACC AATCCGGTCG GCTCGACCAT GCGCCGCGCC
ATGGACGGCG CCAGCGAGTT GGTGATCGGG GTGTTTCGCG CCGGCATGGC AAAGCTCTGA
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| Protein sequence | MVLFTDLPTI RSRRRLPRWR ALLVGLLVMT IGSNQALAAN QSVQGAKKED VAGGYDTDAP
SAILIDGESG SVLFEKNADE LRAPSSMLKL MTVELVFHLL AKGEIKPTDE YKISEYAWRR
GGAPAGNSTM FAEIHSKVAV EDLLKGAIIQ SGNDSCIALA EGIAGSEPAF VERMTKRARE
IGLTQSTFAN SNGLPDPGNK MSVRELGRLA RHIIQTYPND YKLFSEKEFT WNKIRQTNRN
PLLNTFNGAD GLKTGYTKDG GYGMVGSAVQ NGMRLIVVVN GIDDIDDRAS EVKKLLEWGF
RNFESRALFA SDATIGYARV FGGEKRYVPL IPAEPVRVMV RKNGSDRLIA RIVYTGPVAA
PVDAGRRIGV VRVWRGPNLA VEVPLQAAET NPVGSTMRRA MDGASELVIG VFRAGMAKL
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