Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2676 |
Symbol | |
ID | 3910469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3057767 |
End bp | 3058711 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884576 |
Product | rare lipoprotein A |
Protein accession | YP_486289 |
Protein GI | 86749793 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.36166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.127788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGATTC GCGGACGAGA GTCGTTGGAT CGCGCCGCGC GGGTGGTTGC CGCTGCGGGG GCGTGTCTTG TTCTCGCCAA TTGCGCGCAA TCCGGCAAGT TCAGCCGGGT CGATCCGAAA TACGGCGTCT CGACCAGCCC CCGTGTGGTT GCGATGGGAG AGCCGGTGCC GAAGGGCGGC GGTACGTATC GCATCGGTAA GCCCTATGTG GTCGGCGGGC GTACCTATGT CCCGGAAGAA GATGCCAATT ATCGCGCCGA GGGGCTGGCG TCCTGGTACG GCGACAATTT TCACGGACGC CTGACGGCCA ATGGCGAGGT GTTCGACATG GCGTCGCTGT CGGCGGCGCA TCCGACCTTG CCGATCCCGT CTTATGCCCG GGTCACCAAT CTCAGCAATG GCCGTTCGCT GGTCGTGCGC GTCAATGACC GCGGCCCGTA CCACGGCAAC CGGCTCATCG ATGTCTCGAA CCGAGCCGCC GATCTGCTTG AATTCAAACA CAAAGGCACC GCGCGCGTGC GGGTCGAATA TGTCGGCCGG GCGCCGCTCG AAGGCTCCGA CGACCGCCAG CTTGTCGCCA CCCTGCGGAC CAACGAACCG GCACCGGCGC CGGCGACGGT CCGGATCGCC TCGGCCCGGC CGTTTGTGCC GGACATGCAG GGCGGTGGGC TCGCGACCCG TGCGATCCGC GGCGACGTTC CGCTGCCGGA AGGGCGGCCG TATTCGCTGG GCAATACCTC GGTTGATGTC GCCTCTGTCG GCGCGACCTC GGAAATCTCC GCCTCGCGCA GTTCGCGCAC GGCTGGCCGA ACACTGGCGC GCAATCAGCA CGCTGTTTCC TACGACAGCA GCGGCAGCTA CGCCGAGACC GCCGCTCGCG CAGAGGCGCC GTCGCGCGCC AGTGACGAGA TCGGCAGCCT GCTGTCGGCG CGCGGGCTGT ACTGA
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Protein sequence | MGIRGRESLD RAARVVAAAG ACLVLANCAQ SGKFSRVDPK YGVSTSPRVV AMGEPVPKGG GTYRIGKPYV VGGRTYVPEE DANYRAEGLA SWYGDNFHGR LTANGEVFDM ASLSAAHPTL PIPSYARVTN LSNGRSLVVR VNDRGPYHGN RLIDVSNRAA DLLEFKHKGT ARVRVEYVGR APLEGSDDRQ LVATLRTNEP APAPATVRIA SARPFVPDMQ GGGLATRAIR GDVPLPEGRP YSLGNTSVDV ASVGATSEIS ASRSSRTAGR TLARNQHAVS YDSSGSYAET AARAEAPSRA SDEIGSLLSA RGLY
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