| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2673 |
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| Symbol | |
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| ID | 3910466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3054721 |
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| End bp | 3055956 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884573 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_486286 |
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| Protein GI | 86749790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.150858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCG ATTTTTCGAC GTTGCTCTTG GTCGCGACGC TCATCTGCAC GCTACTCGGG
GGAATGCTCC TGTACTTCGG CACCCAAGAG AAGATCCCTG CGCTCTACTG GTGGGGTGCC
GCTTATCTGA TCGGCGCGGC CACCGTCGCG CAGTGGCAGC TGCTTGGATC GGTTCTGCCG
GAACTGGTGG TGCTGTCGCT GGCCAGCGCG GGGTTCATCG CCTGCGGCAT GATGTGGAAC
GCGGCGCGCG TGTTCCACGG CCGTAGACCG AACTGGCCGG GTCTCGTGCT CGGCGCGATC
GCCTGGATCG CGGCGGTGAT CTTGCTGCCG CCGGACTCGT CGTCGCTGCG CATGACCCTC
GGGGCCGGCA TCGTGGCAAT CTATGCCGCT CTCACCGCGA ACGAGCTGTT TTCCGAACGC
CGCAAGGCTG TGATGCGGCG TTGGCCGGCG ATGCTCGTCC CGCTGCTGCA CGGCGGCGTT
CTGATGCTGC CGGTGGTGCT CGCCGAACTG CTGCCGGCCC GGAGCAACGC CTATACCAGC
AATATCTGGG TGCTGATTTT CGCGATCGAG CTGGTGCTGT ATGCGATCGG CACCGTCTTC
GTGGTCTTCA TGCTGGTCTC GGAGCAGACC GTGAGCGCCC ACAAGACGGC GGCGGCGCTC
GATCCGCTCA CCGGGTTGTT CAACCGGCGC GGCTTCTCGG AAGCCACCGC GCGGATGATC
GAGCGCGAAG CCGAGGCCGG GCGTCCGGTC ACGGTGATGA TCTTCGACCT CGATCACTTC
AAATCGATCA ACGACCGGTT CGGTCATCCG GCGGGCGACG AGGTGATCAA ACTGTTCGCC
GCGATCGTGT CCGGGTCGCT GCGGATATCC GACCTGTGCG GCCGGATCGG CGGCGAGGAA
TTCGCGGCCT TGCTGCCGTG CTCCATCGAC GAAGCGATGA CCGCGGCCGA GCGGGTGCGC
GAAGCCTTCG AGGGTTGCGG CCTGGAAGTC GACGGCGCGC CGATCGCGAC CACCGTCAGC
ATCGGCGTTG CCGGTGGGCC GGCGAATATC GAACTCGACG TTCTGCTCGC AGCGGCCGAT
ACCGCGCTGT ATCAGGCCAA GCGTGGCGGC CGCAACCGCG TGGTCGCCAC CGTCGAACAG
CCGCTGTCGC TGGAGCAGGG CCGCCGCCGC GCCGCGCAGC GTCACGAGCC GGTCCAGCAG
GTGATCGTCC GCAATGCGAT GCGCATCGGC GCCTGA
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| Protein sequence | MSLDFSTLLL VATLICTLLG GMLLYFGTQE KIPALYWWGA AYLIGAATVA QWQLLGSVLP
ELVVLSLASA GFIACGMMWN AARVFHGRRP NWPGLVLGAI AWIAAVILLP PDSSSLRMTL
GAGIVAIYAA LTANELFSER RKAVMRRWPA MLVPLLHGGV LMLPVVLAEL LPARSNAYTS
NIWVLIFAIE LVLYAIGTVF VVFMLVSEQT VSAHKTAAAL DPLTGLFNRR GFSEATARMI
EREAEAGRPV TVMIFDLDHF KSINDRFGHP AGDEVIKLFA AIVSGSLRIS DLCGRIGGEE
FAALLPCSID EAMTAAERVR EAFEGCGLEV DGAPIATTVS IGVAGGPANI ELDVLLAAAD
TALYQAKRGG RNRVVATVEQ PLSLEQGRRR AAQRHEPVQQ VIVRNAMRIG A
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