Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2670 |
Symbol | |
ID | 3910463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3052952 |
End bp | 3053380 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884570 |
Product | phenylacetic acid degradation-like protein |
Protein accession | YP_486283 |
Protein GI | 86749787 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.127788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATG CGAGAATGAG CGTAGCCGAT CTCGAGAGTT TTTTGAATCG TGAGTTTCCG CAGGCTTTCG GCTACGGCGA CATTTCAATC GAATCCGCGG ACGGTCGCTC CAGCCTGCTG CGGCAGCGTT ACAGCGATCG CATGCTGCGA CCCGGCGGAA CCGTCTCGGG GCCGACGCTG ATGGCGCTGG CGGATTTCGC GATGTACGTG GTGCTGCTGT CGGCGATCGG CCCGGTCGCG CTCGCCGTCA CCACCAATCT CAACATCAAT TTCCTGCGCA AGGGCCAGCC CGGACAGGAT GTCGTTGCGG TGGCGCGGCT GCTCAAGCTC GGCAAGCGGC TTGCGGTCGG CGAGGTGACG CTGCTGTCGG GCACGTCGCC CGACCCGATC GCCCATGTCA CCTCGACCTA TTCCATTCCG ATCGCTTGA
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Protein sequence | MTHARMSVAD LESFLNREFP QAFGYGDISI ESADGRSSLL RQRYSDRMLR PGGTVSGPTL MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVARLLKL GKRLAVGEVT LLSGTSPDPI AHVTSTYSIP IA
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