Gene RPB_2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2670 
Symbol 
ID3910463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3052952 
End bp3053380 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID637884570 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_486283 
Protein GI86749787 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATG CGAGAATGAG CGTAGCCGAT CTCGAGAGTT TTTTGAATCG TGAGTTTCCG 
CAGGCTTTCG GCTACGGCGA CATTTCAATC GAATCCGCGG ACGGTCGCTC CAGCCTGCTG
CGGCAGCGTT ACAGCGATCG CATGCTGCGA CCCGGCGGAA CCGTCTCGGG GCCGACGCTG
ATGGCGCTGG CGGATTTCGC GATGTACGTG GTGCTGCTGT CGGCGATCGG CCCGGTCGCG
CTCGCCGTCA CCACCAATCT CAACATCAAT TTCCTGCGCA AGGGCCAGCC CGGACAGGAT
GTCGTTGCGG TGGCGCGGCT GCTCAAGCTC GGCAAGCGGC TTGCGGTCGG CGAGGTGACG
CTGCTGTCGG GCACGTCGCC CGACCCGATC GCCCATGTCA CCTCGACCTA TTCCATTCCG
ATCGCTTGA
 
Protein sequence
MTHARMSVAD LESFLNREFP QAFGYGDISI ESADGRSSLL RQRYSDRMLR PGGTVSGPTL 
MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVARLLKL GKRLAVGEVT
LLSGTSPDPI AHVTSTYSIP IA