Gene RPB_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2652 
Symbol 
ID3910444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3030753 
End bp3031436 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID637884551 
ProductMerR family transcriptional regulator 
Protein accessionYP_486265 
Protein GI86749769 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00282985 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0609514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAAG CGCCGGATGC ATTCCGAACC ATCAGCGAAG TCGCCGACGA ACTCGACATT 
CCGCAGCACG TCTTGAGGTT CTGGGAGACG CGGTTCACCC AGATCAAGCC GATGAAGCGC
TCGGGCGGCC GGCGCTACTA CCGGCCGGAC GACGTCGACC TGCTCAAGGG CATCCGCCGG
CTGCTGTACG GCGAAGGCTA CACCATTCGC GGCGTCCAGC GGATCCTCAA GGAGCACGGC
ATCAAGTCGG TGCAGCGGCT CGCCGACAAC GAGGCCAGCG CCACTTTCGG CGCGGTCGAG
GAAGCGATCG GCCGCAGCGT CGCCGAGGAA GACTACGAGC CCGCGCCCGG CGGCATCGAT
CTCGACGACG ACGACTACGA GGGCGAGAAC GAGGGCCTCG ACCTGCACGC CATGATGGCG
GAACCCGACC TGCGCGCCGC AGCGGCACCG GCCCGCTCGG CCAGCCAGGC AACGGCCCGT
CGCGCCCCCG CATTCGAGGA CGACGATGAC GACCTGCCGG CAATGGCGTC GCCGGCGCCA
CGGCTGAATC TGCCGCCGCT GGACCTGCCG CCGGCGAATA ATGCCCCGGC GCGTCCGCCG
GTCGATCTCG CCCCGCTGAA GGCCGTGCTG CAGGACCTGA TCGCCTGCCG CGAGGCGCTC
GACGCCGCAA TGAAGGACGG CTGA
 
Protein sequence
MDKAPDAFRT ISEVADELDI PQHVLRFWET RFTQIKPMKR SGGRRYYRPD DVDLLKGIRR 
LLYGEGYTIR GVQRILKEHG IKSVQRLADN EASATFGAVE EAIGRSVAEE DYEPAPGGID
LDDDDYEGEN EGLDLHAMMA EPDLRAAAAP ARSASQATAR RAPAFEDDDD DLPAMASPAP
RLNLPPLDLP PANNAPARPP VDLAPLKAVL QDLIACREAL DAAMKDG