| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2645 |
|---|
| Symbol | |
|---|
| ID | 3910437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3025362 |
|---|
| End bp | 3026231 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637884544 |
|---|
| Product | Alpha/beta hydrolase |
|---|
| Protein accession | YP_486258 |
|---|
| Protein GI | 86749762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0678318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACGC CGATCCGATC CAGGACGCTC GAGGCAAACG GTCTCGGCTT CGCGATCGAC
GAAGCCGGCG AGGGCGACAC CACGGCGCTG TTGTTGCACG GCTTCCCGGA AGCGCGCCAG
TCGTGGCATC GGCAACTCCC GGCGCTGGCC GCGCTCGGCT GGCATGCGGT CGCGCCGGAT
CTGCGCGGCT ATGGGGGAAC GACGCGGCCT CGGGCGCAGG CGGCCTATCA TCTCGATCAC
CTCACCGACG ACGTCGCGGC ATTGTTCGCG GCGCTCGGCG GCAAGCGCCG GATTCTGATC
GGCCACGATT GGGGCGGGGT GATCGCCTGG CAGGCTGCGC TGCGCGGCAA GCTGCCGCTC
GACGCCCTGA TTATCCTCAA CGCACCGCAT CCGGACGTGT TCGCGCGCGT GCTGGCCGAT
GGCTGGCGGC AGAAGCGCAA GTCCTGGTAT GTCGCGTTGT TCCAGCTGCC CTGGCTGCCG
GAATGGCTGA TGACCCGCAA CGACGGCGCA GCGCTGGCGC AGATGTTTCG CAAGCACAGC
CCGACGATCT CGGACGCGCA GATCGAGATC TATCGCCGCA ACGCGATCCA GCCCGGTGCG
GCGATCGCGA TGATCAATTA CTACCGCGCC AATTTCACCG CGCTCGGCGG CGGCGCAGGG
ACCCATCCCA AGCTGACCGT GCCGACCCTG ATGATCTGGG GGGAGGACGA TCTGGCGCTC
GATATCGCGC TGACAGAGGG CAACGAGGCC CATGTCGCCG ACTTCACGCT GCGGCGGCTG
CCCGGCGCCT CGCATTGGGT GCAGCAGGAC GCGCCGGATC AGGTCAACGC CCTGATCGCG
GACTGGGCGC GCGGCAAGGG GCTGGCTTAG
|
|---|
| Protein sequence | MVTPIRSRTL EANGLGFAID EAGEGDTTAL LLHGFPEARQ SWHRQLPALA ALGWHAVAPD
LRGYGGTTRP RAQAAYHLDH LTDDVAALFA ALGGKRRILI GHDWGGVIAW QAALRGKLPL
DALIILNAPH PDVFARVLAD GWRQKRKSWY VALFQLPWLP EWLMTRNDGA ALAQMFRKHS
PTISDAQIEI YRRNAIQPGA AIAMINYYRA NFTALGGGAG THPKLTVPTL MIWGEDDLAL
DIALTEGNEA HVADFTLRRL PGASHWVQQD APDQVNALIA DWARGKGLA
|
|---|
| |