Gene RPB_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2641 
SymbolhppA 
ID3910433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3020836 
End bp3022959 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content66% 
IMG OID637884540 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_486254 
Protein GI86749758 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.141253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTT TATGGGTGAT CGTGCTCTGC GGAGCGCTTG CGATCGTATA CGCCGTCTGG 
GCGACCTCGT CGGTGCTCGC CGCCGATCAG GGCAACGCGC GGATGCAGGA AATCGCCGCC
GCCGTGCGTG AAGGCGCGCA GGCCTATCTG AAGCGCCAGT ATATGACCAT CGCCATCGTC
GGCGTGGTGA TCTTCGCGCT GCTCGCTTAC TTTCTCGGCG TCCTCGTCGC GATCGGCTTC
CTGATCGGCG CGGTGCTGTC GGGCGCGGCC GGCTTCATCG GCATGAACGT GTCGGTGCGT
GCCAACGTCC GCACCGCGCA GGCGGCGACC ACCTCGCTCG CCGGCGGCCT CGAGCTCGCC
TTCAAGGCTG GCGCCATCAC CGGCCTTCTG GTCGCGGGTC TCGCGCTGCT CGGCGTGACG
CTGTATTTCA TCTATCTGAT CCACTACGCC AATCTGGCTC CGAACAGCCG CACCGTGGTC
GACGCGCTGG TCGCACTCGG CTTCGGCGCC TCGCTGATCT CGATCTTCGC TCGTCTCGGC
GGCGGCATCT TCACCAAGGG TGCGGACGTC GGCGGTGATC TCGTCGGCAA GGTCGAAGCC
GGCATTCCGG AAGACGATCC GCGCAACCCG GCGACGATCG CCGACAACGT CGGCGACAAT
GTCGGCGACT GCGCCGGCAT GGCCGCCGAT TTGTTCGAGA CCTATGCGGT GACCGCGGTC
GCCACCATGG TGCTCGCCGC GATCTTCTTC GCCGCCACGC CTGACCTGTT GCTCAACATG
ATGACGCTGC CGCTCGCCAT TGGCGGCATC TGCATCCTGA CCTCGATCGC CGGCACCTTC
TTCGTCAAGC TCGGCGCATC GCAGTCGATC ATGGGGGCGC TGTACAAGGG GCTGATCGCC
ACCGGCGTGC TGTCGCTGAT CGGCGTCGGC GCCGTGATCC ACCAGTTGAT CGGCTTCGGT
CCGCTGGCCG GCGTCAGCTA CACCGGCCTG GCGCTGTTCG AATGCGGTAT CGTCGGTCTC
GCCGTCACCG GCCTGATCAT CTGGATCACC GAATACTACA CCGGCACCGA CTACCGGCCG
GTGAAGTCGA TCGCGCAATC GTCGGTCACC GGCCACGGCA CCAACGTGAT CCAGGGCCTC
GCCATCTCGA TGGAATCGAC CGCGCTGCCC GCGATCGTGA TCATCGCCGG CATCCTGGTC
ACCTACAGCC TCGCCGGCCT GTTCGGCATC GCGATCGCCA CCACCACGAT GCTGGCGCTG
GCCGGCATGA TCGTGGCGCT CGACGCCTTC GGCCCGGTCA CCGACAATGC CGGCGGCATC
GCCGAAATGG CCGGCCTGCC GAAGGAAGTC CGCAAAGCCA CCGACGCGCT CGACGCCGTC
GGCAACACCA CCAAGGCGGT GACCAAGGGC TACGCGATCG GCTCCGCCGG TCTCGGCGCG
CTGGTGCTGT TCGCGGCGTA TAATGAAGAT CTCAAATTCT TCATCGCCAA CGCCGCGAAG
TATCCGTACT TCGAGGGCGT GCTGCCCGAC TTCTCGCTGA ACAACCCCTA CGTCGTGGTC
GGCCTGCTGT TCGGCGGCCT GCTGCCGTAT CTGTTCGGCG CGATGGGCAT GACCGCGGTC
GGCCGCGCCG CCGGCGCGAT CGTCGAGGAA GTGCGTCGCC AGTTCCGCGA AAAGCCGGGC
ATCATGAAGG GCACCGACAA GCCGGATTAC GGCAAGGCGG TCGACCTGCT GACCAAGGCG
GCGATCAAGG AAATGATCAT CCCGTCGCTG CTGCCGGTGC TGTCGCCGAT CTTCGTCTAC
TTCGTGATCT ACGCGATCGC GGGCGGCGGT CCGGCCGGCA AGTCGGCGGC GTTCTCCGCG
GTCGGCGCGA TGCTGCTCGG CGTCATCGTC ACCGGCCTCT TTGTGGCGAT CTCGATGACT
TCGGGCGGCG GCGCCTGGGA CAACGCCAAG AAGTACATCG AGGACGGCCA CCACGGCGGC
AAGGGCTCCG ACGCCCACAA GGCCGCGGTG ACCGGCGACA CCGTCGGCGA CCCCTACAAG
GACACGGCGG GCCCCGCCGT GAACCCGATG ATCAAGATCA CCAACATCGT GGCACTCTTG
CTGCTGGCGA TCCTGGCGCA CTGA
 
Protein sequence
MTALWVIVLC GALAIVYAVW ATSSVLAADQ GNARMQEIAA AVREGAQAYL KRQYMTIAIV 
GVVIFALLAY FLGVLVAIGF LIGAVLSGAA GFIGMNVSVR ANVRTAQAAT TSLAGGLELA
FKAGAITGLL VAGLALLGVT LYFIYLIHYA NLAPNSRTVV DALVALGFGA SLISIFARLG
GGIFTKGADV GGDLVGKVEA GIPEDDPRNP ATIADNVGDN VGDCAGMAAD LFETYAVTAV
ATMVLAAIFF AATPDLLLNM MTLPLAIGGI CILTSIAGTF FVKLGASQSI MGALYKGLIA
TGVLSLIGVG AVIHQLIGFG PLAGVSYTGL ALFECGIVGL AVTGLIIWIT EYYTGTDYRP
VKSIAQSSVT GHGTNVIQGL AISMESTALP AIVIIAGILV TYSLAGLFGI AIATTTMLAL
AGMIVALDAF GPVTDNAGGI AEMAGLPKEV RKATDALDAV GNTTKAVTKG YAIGSAGLGA
LVLFAAYNED LKFFIANAAK YPYFEGVLPD FSLNNPYVVV GLLFGGLLPY LFGAMGMTAV
GRAAGAIVEE VRRQFREKPG IMKGTDKPDY GKAVDLLTKA AIKEMIIPSL LPVLSPIFVY
FVIYAIAGGG PAGKSAAFSA VGAMLLGVIV TGLFVAISMT SGGGAWDNAK KYIEDGHHGG
KGSDAHKAAV TGDTVGDPYK DTAGPAVNPM IKITNIVALL LLAILAH