| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2619 |
|---|
| Symbol | |
|---|
| ID | 3910411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3001128 |
|---|
| End bp | 3001622 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884518 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_486232 |
|---|
| Protein GI | 86749736 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.329844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGGT CACCTGCAAG GAACCTTCAC CCGCTGCCAC CGGCTCCCGA GCCGGCGTCC
GACGCGGCCG TCCTCACCGA GCGCTTCAGC GCCTGGCAGG CGCAGGGGCT GGACGCCTCG
CGCTGCCCGG TGCGCAACGT GCTCGACCAT CTCGGCAGCA AATGGAGCAC GCTGTTGCTG
ATCGCATTGG CCGAAAAGCC TGTGCGATTC AATGCGCTAC TGCGAACAGT TCCAGACATT
TCGAGGCGGA TGCTGACGCA GACGCTGCGG CATCTGGAGC GCGACGGCCT GGTTGCCCGA
CAGGTATTCC CGACCAAGCC GCCGAGTGTC GAGTATCGGC TGTCCGCCGC AGGTCGCTCG
GTGCTGACGC CGCTCACGGC GCTGGTCGGC TGGGCGGAGA GCCATTTTGC CGAGATCGAA
CAGGCGCGGG CACGCTTCGA CGCGGCAGAG GCGACAGCGC CGGTGTCGAG CGGCGAGACT
GCGTATCCCC TCTAG
|
|---|
| Protein sequence | MSRSPARNLH PLPPAPEPAS DAAVLTERFS AWQAQGLDAS RCPVRNVLDH LGSKWSTLLL
IALAEKPVRF NALLRTVPDI SRRMLTQTLR HLERDGLVAR QVFPTKPPSV EYRLSAAGRS
VLTPLTALVG WAESHFAEIE QARARFDAAE ATAPVSSGET AYPL
|
|---|
| |