Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2617 |
Symbol | |
ID | 3910409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2999539 |
End bp | 3000162 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884516 |
Product | TetR family transcriptional regulator |
Protein accession | YP_486230 |
Protein GI | 86749734 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.923721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAG GTGAGGCGGC TGTCAACAGC ATGGACAGGA TCGATTTCGA AGCGAGTGAC CGCGAGCGCC CAGTGATGGA GGCTACATTG CGCCTCATCG GGCGCGGTGG GCTCAAGGGC GTCACCCACA GGGCGGTCGC GGCTGAAACC GGCCTGTCGC TCGGCGCGAT CACCCATCAT TTCGGCACGC GCGATCTGCT GGTCGAGGCC GCGCTGAAAT TCGCCCTGAT GCGCGAGGTC AGGCGTCTGC GCGCGCTGGC GCTGAGCCTG CAGAGCGACG CGCTCGACGT GGAAGCGTGG ATCGACGCGC TGGTCGGCTG GTACACCAAA GAACTCGACT CCGACGCCGA GATTCATATC GCCTGTTACG AGGCGTTCCT GGCGGCGGCG CGCGACGATC GCTACCGGCC TATCGTCGCC GAATGGTACG AGACCTGGCG GCGCAGCGCC GAGCTCGCGC TGACCGCGGC GGGCTCGAGC AGGCCGCAGC TGCATGCGGA GATCTTCGTC TCGGCGCTGG TGGGGATCGT GCTGCAGCAG CTCGCGGCTC CACGCCGGAA ATTCCGGGCG GAGACGCGGG CTGCCTTGTC CGAATTGATG CGTGGCCTGA TCGGAAGAAC CTAG
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Protein sequence | MIEGEAAVNS MDRIDFEASD RERPVMEATL RLIGRGGLKG VTHRAVAAET GLSLGAITHH FGTRDLLVEA ALKFALMREV RRLRALALSL QSDALDVEAW IDALVGWYTK ELDSDAEIHI ACYEAFLAAA RDDRYRPIVA EWYETWRRSA ELALTAAGSS RPQLHAEIFV SALVGIVLQQ LAAPRRKFRA ETRAALSELM RGLIGRT
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