| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2608 |
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| Symbol | |
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| ID | 3910400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2991336 |
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| End bp | 2993621 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884508 |
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| Product | (p)ppGpp synthetase I |
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| Protein accession | YP_486222 |
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| Protein GI | 86749726 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0347856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAG GCCGCCGCAT CCCGAGACAG GTGGAGGCCG TGGCCGATGC GGCCACCGTG
GCCACGCCCG TCGTCGTCCC GCCGAAGCCG CGCGGCGCGC GCGCCAGGAT GATGCGACAA
TACGACCTCG TCGAACTGGT TCGGAATTAC AATCCGAACA CCGACGAAGA CATGCTCAAC
CGTGCCTATG TCTACGCGAT GAAGGCGCAT GGCGAGCAGA CCCGCGCCTC GGGCGATCCG
TATTTCTCGC ATCCGCTCGA AGTCGCGGCG ATTCTCACCA ATCTCAAGCT CGACGACGCC
ACCATCGTCG CGGCGCTGCT GCACGACACG ATCGAAGACA CCGAGGCGAC CCGGACCGAG
ATCGACAAAT TGTTCGGCCA TGAGATCGGC TCGCTGGTCG AGGGGCTGAC CAAGCTGAAG
CGGCTCGAAC TGGTGTCGCG CGAGGCCAAG CAGGCGGAGA ACCTTCGCAA GCTGCTGCTG
GCAATCGCCG ACGACGTTCG CGTGCTGCTG ATCAAGCTCG CCGACCGCCT GCACAACATG
CGCACGCTGG ACTTCGTGCC TCCGGCGGCG CGCCAACGCA TCGCCGAAGA AACGCTCGAC
ATCTACGCAC CGCTCGCAGG CCGTATGGGC ATGCAGGAGA TGCGCGAGGA GCTGGAGGAC
CTGTCGTTCC GGACGCTGGA TCCCGAGGCG TTCGCGGTGG TGATGCAGCG GCTCGACGCT
TTGGCCGAGC GCAATCGCAA TCTGATCGGT GAGATCGAAA CGCAGCTCTG CGCCAACCTC
GCCAACAACG GCATCGCCGC CGAGGTCACC GGCCGGCGCA AGCGGCCGTT TTCGATCTGG
ACCAAGATGG AGCGCAAGTC GGTCGGCTTC GAACAGCTGT CGGACATCTA CGGCTTCCGC
GTCGTGCTCA ACGACATCGA GGCCTGCTAC CGCGCGCTCG GCGTGGTCCA TACGACGTGG
CCGATGGTGC CTGGACGGTT CAAGGACTAC ATCTCGACGC CGAAGCAGAA CGACTATCGT
TCGCTGCACA CGACGGTGAT CGGCCCGGGC CAGCAGCGCG TCGAGCTGCA ATTCCGTACC
CAGGACATGA ACCAGATTGC CGAATACGGC ATCGCCGCGC ACGCTTTCTA CAAGGACGGC
GTCGGCTCGC CGACCGAACT GCTCAATCGC GAATCCAACG CCTTCGCCTG GTTGCGCCAC
ACCGTCGAGA TGCTGTCCGA GAGTACGAAC CCGGAGGAAT TCCTCGAGCA CACCAAGCTC
GAGCTGTTCC ACGACCAGGT GTTCTGCTTC ACGCCGAAGG GCAAGCTGAT CGCGTTGCCG
CGGGCCGCCA ACGTCATCGA TTTCGCCTAT GCGGTGCATA CCGACGTCGG CAACAGCGCG
GTCGGCTGCA AGATCAACGG CAAATTCGCG CCGCTGTCGT CGGAATTGCA GAACGGCGAC
GAGGTCGAGG TGCTGACGTC CAGCGTGCAG TCGGCGCCGC CGGCGGCGTG GGAGTCGCTG
GCGCGAACCG GCAAGGCGCG CGCCGCGATC CGCCGCGCCA CCCGCACGGC GATGCGCGAC
CAATATGCGG GCCTCGGCCG CCGCATCGTC GAACGGCTGT TCGCGCGCGC CAAGATCGAA
TACGCCGACG ACAAGCTCAG GGGTGCGCTG CCGCGGCTGG CGCGGGCCTC CATCGAGGAG
GTGATGGCCT CCGTCGGGCG CGGTGAAATG AAAGCGTCCG ACGTCGCCCG CGCGATGTAT
CCCGACTACA AGGAAGAGCG CATCGCGCGG TTCGGCGGCA AGAAGCCCGA AAAGGCGGGG
ACCAAGGCCG TCGGTGAACC GAGCAAGGTG GGCGCCGCAG TGCCGATCGG CGGGATTCAC
TCCGGATTGC CGGTGAAGTT CGCGCCGGAC GGCGGCGCGG TGCCCGGTGA TCGCATCATC
GGCATCGTCA CGCCGGGCGA GGGCATCACC ATCTATCCGA TCCACTCGCC GGCGCTGAAG
GACTTCGAGG AAGAGCCGGA GCGCTGGCTC GATGTGAAGT GGGACATCGA CGAGACCACG
CCGCAGCGCT TCCCGGCGCG GCTGTTCGTG CAGAACGTCA ACGAGCCCGG CAGCCTCGCG
CAGATCGCCG GCGTGATCGC CGAGCACGAC GGCAATATCG ACAACATCAA CATGAGCCGC
CGTTCGCCGG ACTTCACCGA ACTCACCATC GATCTCGAGG TCTACGACCT CAAGCATCTC
AGCGCCATCA TCGCCCAGCT TCGCGCCAAG GCGGTCGTGG CCCACGTCGA GCGCGTCAAT
GGATAG
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| Protein sequence | MASGRRIPRQ VEAVADAATV ATPVVVPPKP RGARARMMRQ YDLVELVRNY NPNTDEDMLN
RAYVYAMKAH GEQTRASGDP YFSHPLEVAA ILTNLKLDDA TIVAALLHDT IEDTEATRTE
IDKLFGHEIG SLVEGLTKLK RLELVSREAK QAENLRKLLL AIADDVRVLL IKLADRLHNM
RTLDFVPPAA RQRIAEETLD IYAPLAGRMG MQEMREELED LSFRTLDPEA FAVVMQRLDA
LAERNRNLIG EIETQLCANL ANNGIAAEVT GRRKRPFSIW TKMERKSVGF EQLSDIYGFR
VVLNDIEACY RALGVVHTTW PMVPGRFKDY ISTPKQNDYR SLHTTVIGPG QQRVELQFRT
QDMNQIAEYG IAAHAFYKDG VGSPTELLNR ESNAFAWLRH TVEMLSESTN PEEFLEHTKL
ELFHDQVFCF TPKGKLIALP RAANVIDFAY AVHTDVGNSA VGCKINGKFA PLSSELQNGD
EVEVLTSSVQ SAPPAAWESL ARTGKARAAI RRATRTAMRD QYAGLGRRIV ERLFARAKIE
YADDKLRGAL PRLARASIEE VMASVGRGEM KASDVARAMY PDYKEERIAR FGGKKPEKAG
TKAVGEPSKV GAAVPIGGIH SGLPVKFAPD GGAVPGDRII GIVTPGEGIT IYPIHSPALK
DFEEEPERWL DVKWDIDETT PQRFPARLFV QNVNEPGSLA QIAGVIAEHD GNIDNINMSR
RSPDFTELTI DLEVYDLKHL SAIIAQLRAK AVVAHVERVN G
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