| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2606 |
|---|
| Symbol | |
|---|
| ID | 3910398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2989706 |
|---|
| End bp | 2990335 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637884506 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486220 |
|---|
| Protein GI | 86749724 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0253982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC CTGCGAGCAA CAAAATCGCG CTGTTCATCG ATGGCGCCAA CCTTTATGCG
ACTGCGAAAA CACTCGGTTT CGATATCGAT TACAAACGTC TGCTCAAGGA ATTTCACAGT
CGCGGCACGT TGATCCGCGC CTTTTACTAC ACCGCCATCA TCGAGGATCA GGAATATTCC
TCGATTCGCC CGCTGATCGA TTGGCTCGAC TACAACGGCT ACACCGTGGT CACCAAGGCG
ACCAAGGAAT TCATCGACGC CAGCGGCCGC CGCAAGGTCA AGGGCAACAT GGATATCGAA
CTCGCGGTCG ACGCCATGGA ACTCGCCGAG CACATCGACC AGATGGTGCT GTTCTCCGGT
GACGGCGACT TCCGGTCGCT GGTTGAAGCC GTCCAGCGCC GTGGCGTCCG CGTCACGGTG
ATCTCGACGA TCTCCAGCCA ACCGCCGATG ATCGCCGACG AACTCCGGCG TCAGGCCGAT
GTCTTCACCG ACCTGGTAGA GCTTCAGTCG AAAATCGGCC GCGATCCGGC CGATCGCCCG
CCGCCGCGCG AACCGCGCCA CACGCCGCAG TTCCTGCAGC GCTCGGCTGC GATGGCGCCC
AGGGGCGGTG ACGACGATTT TGAAGACTGA
|
|---|
| Protein sequence | MSTPASNKIA LFIDGANLYA TAKTLGFDID YKRLLKEFHS RGTLIRAFYY TAIIEDQEYS
SIRPLIDWLD YNGYTVVTKA TKEFIDASGR RKVKGNMDIE LAVDAMELAE HIDQMVLFSG
DGDFRSLVEA VQRRGVRVTV ISTISSQPPM IADELRRQAD VFTDLVELQS KIGRDPADRP
PPREPRHTPQ FLQRSAAMAP RGGDDDFED
|
|---|
| |