Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2602 |
Symbol | |
ID | 3910394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2987118 |
End bp | 2988008 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884502 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_486216 |
Protein GI | 86749720 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA AGACGAATTT CCGGGGGTCG TTCACCGCCT TGGTCACGCC TTTCAAGGAT GGTGCGCTCG ACGAGCAGGC GTTTCGCAGT CTGGTCCAAT GGCAGATCGC GGAAGGGACC CACGGACTGG TGCCGGTCGG GACCACAGGG GAAAGCCCGA CGCTGAGCCA TGACGAGCAC CACAAGGTCG TGGAATGGTG CGTCGAGGAG GCGAAGGGAC GGGTGCCGGT GATCGCGGGG GCCGGATCGA ACTCCACGCG CGAAGCCGTC GAACTCGCCA GGCACGCCGA GCAGGCGGGC GCGGACGCCG TCCTGGTGGT GACGCCGTAT TACAACAAGC CCACCCAGGA GGGCATGTAT CAGCACTTCA AGGCGGTCAA CGACGCGATC GGGATTCCGA TCATCATCTA CAACATCCCG CCGCGCTCCG TCGTCGACAT GTCGGTCGAC ACCATGAGCC GGCTGTACGA GCTGAAGAAC ATCGCCGGCG TCAAGGACGC CACCGCCAAT CTCGGACGGG TGTCGCAGCA GCGCCACGCG ATGGGCCCCG ATTTCATCCA GCTCTCCGGC GAGGACATGA CCGCGCTGGC CTATATGGCA GCCGGCGGCC ATGGCTGCAT CTCGGTGGTG TCGAATATCG CGCCGAAGCT CTGCGCCGAC CTCATGGGCG CGGTACTGGC CGGCGACTAT CCCGGCGCAT TGAAGATTCA GGATCGCCTG GTGCCGCTGC ACGATGCGGT GTTCAAGGAG CCCGGCGTGG CGGGCGCCAA GCACGGCTTG ACTCTGCTCG GCCGGATCCG GGAAGAGGTG CGGCTGCCGC TGATGCCGGT GACCGAGCCG ACCGGCGCCA CGATCCGCGC CGCCATGATG CATGCCGGAC TGCTGAACTG A
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Protein sequence | MAAKTNFRGS FTALVTPFKD GALDEQAFRS LVQWQIAEGT HGLVPVGTTG ESPTLSHDEH HKVVEWCVEE AKGRVPVIAG AGSNSTREAV ELARHAEQAG ADAVLVVTPY YNKPTQEGMY QHFKAVNDAI GIPIIIYNIP PRSVVDMSVD TMSRLYELKN IAGVKDATAN LGRVSQQRHA MGPDFIQLSG EDMTALAYMA AGGHGCISVV SNIAPKLCAD LMGAVLAGDY PGALKIQDRL VPLHDAVFKE PGVAGAKHGL TLLGRIREEV RLPLMPVTEP TGATIRAAMM HAGLLN
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