Gene RPB_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2602 
Symbol 
ID3910394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2987118 
End bp2988008 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID637884502 
Productdihydrodipicolinate synthase 
Protein accessionYP_486216 
Protein GI86749720 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA AGACGAATTT CCGGGGGTCG TTCACCGCCT TGGTCACGCC TTTCAAGGAT 
GGTGCGCTCG ACGAGCAGGC GTTTCGCAGT CTGGTCCAAT GGCAGATCGC GGAAGGGACC
CACGGACTGG TGCCGGTCGG GACCACAGGG GAAAGCCCGA CGCTGAGCCA TGACGAGCAC
CACAAGGTCG TGGAATGGTG CGTCGAGGAG GCGAAGGGAC GGGTGCCGGT GATCGCGGGG
GCCGGATCGA ACTCCACGCG CGAAGCCGTC GAACTCGCCA GGCACGCCGA GCAGGCGGGC
GCGGACGCCG TCCTGGTGGT GACGCCGTAT TACAACAAGC CCACCCAGGA GGGCATGTAT
CAGCACTTCA AGGCGGTCAA CGACGCGATC GGGATTCCGA TCATCATCTA CAACATCCCG
CCGCGCTCCG TCGTCGACAT GTCGGTCGAC ACCATGAGCC GGCTGTACGA GCTGAAGAAC
ATCGCCGGCG TCAAGGACGC CACCGCCAAT CTCGGACGGG TGTCGCAGCA GCGCCACGCG
ATGGGCCCCG ATTTCATCCA GCTCTCCGGC GAGGACATGA CCGCGCTGGC CTATATGGCA
GCCGGCGGCC ATGGCTGCAT CTCGGTGGTG TCGAATATCG CGCCGAAGCT CTGCGCCGAC
CTCATGGGCG CGGTACTGGC CGGCGACTAT CCCGGCGCAT TGAAGATTCA GGATCGCCTG
GTGCCGCTGC ACGATGCGGT GTTCAAGGAG CCCGGCGTGG CGGGCGCCAA GCACGGCTTG
ACTCTGCTCG GCCGGATCCG GGAAGAGGTG CGGCTGCCGC TGATGCCGGT GACCGAGCCG
ACCGGCGCCA CGATCCGCGC CGCCATGATG CATGCCGGAC TGCTGAACTG A
 
Protein sequence
MAAKTNFRGS FTALVTPFKD GALDEQAFRS LVQWQIAEGT HGLVPVGTTG ESPTLSHDEH 
HKVVEWCVEE AKGRVPVIAG AGSNSTREAV ELARHAEQAG ADAVLVVTPY YNKPTQEGMY
QHFKAVNDAI GIPIIIYNIP PRSVVDMSVD TMSRLYELKN IAGVKDATAN LGRVSQQRHA
MGPDFIQLSG EDMTALAYMA AGGHGCISVV SNIAPKLCAD LMGAVLAGDY PGALKIQDRL
VPLHDAVFKE PGVAGAKHGL TLLGRIREEV RLPLMPVTEP TGATIRAAMM HAGLLN