| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2579 |
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| Symbol | |
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| ID | 3910371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2959313 |
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| End bp | 2960638 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884479 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_486193 |
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| Protein GI | 86749697 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.445028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.139963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACG ACAAGGACCG CATCTTCCGG AACCTGTACG GGCTCGACGA TTGGGGCCTC
AAGGGCGCGC GCCGTCGCGG GCAGTGGGAA GGCACCAAGG CGATCATCGA CAAGGGTCGC
GACTGGATCA TCAGCGAGAT GAAGGCGTCC GGCCTGCGCG GCCGCGGCGG CGCCGGCTTT
CCGACCGGCC TGAAATGGTC GTTCATGCCG AAGGACAATG CCGACGGCAG GCCGAGCTAT
CTCGTCGTCA ATGCCGACGA GTCCGAACCT GGTACCTGCA AAGACCGCGA GATCATGCGG
CACGATCCGC ACACGCTGGT CGAGGGCTGC CTGATTGCCG GCTGCGCGAT GGGTGCGCAT
GTCGGCTACA TCTACGTCCG CGGCGAATTC ATCCGCGAGC GCGAGCATCT GCAAGCCGCG
ATCGATCAGG CCTACGAGGC CAAGCTGATC GGCAAGGACA ACGTCCACGG TTATCCGTTC
GACCTGTATG TCGCACATGG TGCCGGCGCT TATATCTGCG GTGAAGAAAC GGCCCTATTG
GAAAGCCTCG AAGGCAAGAA GGGCCAGCCG CGGCTGAAGC CGCCGTTCCC GGCCAATGTC
GGCCTGTACG GCTGCCCGAC CACGGTCAAC AACGTCGAGT CGATCGCGGT GGCGCCCGAC
ATCCTGCGCC GCGGCGCGTC CTGGTTCGCC GGCATCGGCC GGGCGAACAA TGTCGGCACC
AAGCTTTACG GCATCTCCGG CCACGTCAAC ACGCCCTGCG TCGTCGAAGA GGCGATGAGC
ATTCCGTTCC GCGAGCTGAT CGAGAAGCAC GGCGGCGGCA TCCGCGGCGG CTGGGACAAT
CTGCTGGCGA TCATTCCCGG CGGCGCGTCG TGCCCGCTGA TTCCGGCGGC GGATTGCGAA
GAACTGATCA TGGATTTCGA CGGCACCCGC GCGGTGAAGT CGAGCTTCGG CACCGCCGGC
GTCATCGTGA TGGACAAGTC CACCGACGTC GTCGCCGCGA TCGCCCGCAT CAGCTACTTC
TTCAAACACG AGAGCTGCGG CCAGTGCACG CCGTGCCGCG AAGGCACCGG CTGGATGTGG
CGCGTGCTCG ACCGCATGGT GCACGGCCGC GCCCACAAGC GCGAGATCGA CATGCTGCTG
GAAGTCACCA AGCAGGTCGA AGGCCACACC ATCTGCGCGC TCGGCGACGC CGCGGCCTGG
CCGATCCAGG GCCTGATCCG CGCCTTCCGG CCCGAGATCG AGCGCCGCAT CGACGATTTC
TCGCGCAAGG CCACGCTCGA CGATCAGGGC GTGCTCGATC CGGCGCATAT GGTGGCGGCG
GAGTAA
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| Protein sequence | MLDDKDRIFR NLYGLDDWGL KGARRRGQWE GTKAIIDKGR DWIISEMKAS GLRGRGGAGF
PTGLKWSFMP KDNADGRPSY LVVNADESEP GTCKDREIMR HDPHTLVEGC LIAGCAMGAH
VGYIYVRGEF IREREHLQAA IDQAYEAKLI GKDNVHGYPF DLYVAHGAGA YICGEETALL
ESLEGKKGQP RLKPPFPANV GLYGCPTTVN NVESIAVAPD ILRRGASWFA GIGRANNVGT
KLYGISGHVN TPCVVEEAMS IPFRELIEKH GGGIRGGWDN LLAIIPGGAS CPLIPAADCE
ELIMDFDGTR AVKSSFGTAG VIVMDKSTDV VAAIARISYF FKHESCGQCT PCREGTGWMW
RVLDRMVHGR AHKREIDMLL EVTKQVEGHT ICALGDAAAW PIQGLIRAFR PEIERRIDDF
SRKATLDDQG VLDPAHMVAA E
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