| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2563 |
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| Symbol | |
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| ID | 3910353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2941340 |
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| End bp | 2941978 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884461 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_486177 |
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| Protein GI | 86749681 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.385071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATC CGGTGGAAAC CTACATGAAC CTCGTGCCGA TGGTGGTCGA GCAGACCAAC
CGCGGCGAAC GGGCCTACGA CATCTTCTCG CGCCTCCTGA AAGAGCGGAT CATCTTCCTG
ACCGGACCGG TCGAGGACGG CATGTCGACT TTGGTCGTCG CCCAGCTGCT GTTTCTCGAA
GCCGAGAATC CGAAGAAGGA AATCTCGATG TACATCAACT CGCCGGGCGG GGTGGTGACG
TCGGGCCTGG CGATCTACGA CACCATGCAG TTCATCCGCC CGCCGGTGTC GACGCTGTGC
ACCGGCCAGG CCGCCTCGAT GGGGTCGCTG CTGCTGGCCG CCGGCCACAA GGATATGCGG
TTCTCTCTGC CGAACGCCCG GATCATGGTG CATCAGCCGT CCGGCGGCTT CCAGGGCCAG
GCCACCGACA TCATGCTGCA CGCCCAGGAA ATCCTGAACC TGAAGAAGCG CCTCAACGAG
ATCTACGTCC ATCACACCGG CCAGACCTAC AAGGCGATCG AGGACGCGCT GGAGCGCGAC
AAGTTCCTCA CCGCCGACAT GGCGCGCGAT TTCGGGATCG TGGACAAGGT GATCGACAAG
CGCGCCGAGG AGTCGGCCCC CGGCCCGAAG GTGGCCTGA
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| Protein sequence | MRDPVETYMN LVPMVVEQTN RGERAYDIFS RLLKERIIFL TGPVEDGMST LVVAQLLFLE
AENPKKEISM YINSPGGVVT SGLAIYDTMQ FIRPPVSTLC TGQAASMGSL LLAAGHKDMR
FSLPNARIMV HQPSGGFQGQ ATDIMLHAQE ILNLKKRLNE IYVHHTGQTY KAIEDALERD
KFLTADMARD FGIVDKVIDK RAEESAPGPK VA
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