Gene RPB_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2558 
Symbol 
ID3910347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2933968 
End bp2935377 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content62% 
IMG OID637884455 
Productglutamine synthetase, type I 
Protein accessionYP_486172 
Protein GI86749676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0728767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.913477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCAAAGAAGT CCTGAAATCC ATCAAGGACA ACGACGTCAA GTACGTCGAT 
CTTCGTTTCA CCGACCCGCG CGGCAAGTGG CAGCACGTCA CTTTCGACGT CAGCATGATC
GACGAGGAGA TCTTCGCCGA GGGCACGATG TTCGACGGTT CCTCGATCGC CGGCTGGAAG
GCGATCAATG AATCCGACAT GATGCTGATG CTCGACCCGA CCACCGCGGT GATCGACCCG
TTCTTCGCCG AGACCACCAT GGTCATCACC TGCGACATCC TCGAGCCGTC GACCGGTGAG
CCCTACAACC GCGACCCGCG CGGCATCGCC AAGAAGGCCG AGGCCCAGGT CAAGGCGATG
GGCGTCGGCG ACTCGGTGTT CGTCGGTCCG GAAGCCGAGT TCTTCGTGTT CGACGACGTG
CGCTATTCGG CGAACCCGTA CAACACCGGC TTCAAGCTGG ATTCGTCGGA ACTGCCGACC
AACTCCGACA CCGAATACGA GGGCGGCAAT CTCGGCCACC GCATCCGCAC CAAGGCCGGC
TACTTCCCGG TCCCGCCGCA GGATTCGGTG CAGGACATGC GCTCGGAAAT GCTCGGCGCG
ATGGCGCGGA TGGGCGTCAA GGTCGAGAAG CATCACCACG AAGTCGCTTC CGCCCAGCAC
GAGCTCGGCA TGAAGTTCGA CACCCTGACC CACATGGCCG ACCAGATGCA GATCTACAAA
TACTGCATCC ATCAGGTCGC CCACATCTAC GGCAAGACCG CGACCTTCAT GCCGAAGCCG
GTGTTCGGCG ACAACGGCTC GGGCATGCAT GTGCACCAGT CGATCTGGAA GGACGGCAAG
CCGGTGTTCG CCGGCAACAA ATACGCCGAC CTGTCCGAGA CCTGCCTGCA CTACATCGGC
GGCATCATCA GCCACGCCAA GGCGATCAAC GCCTTCACCA ACCCGTCGAC CAATTCCTAC
AAGCGCCTGG TCCCCGGCTA TGAAGCCCCG GTGCTGCTGG CCTATTCGGC CCGCAACCGT
TCGGCTTCCT GCCGCATCCC CTACACCACC AACCCGAAGG CCAAGCGCGT CGAAGTCCGC
TTCCCGGATC CGATGGCGAA CCCCTATCTC GCCTTCGCCG CGATGCTGAT GGCCGGCCTC
GACGGCATCA AGAACAAGAT CGATCCGGGT CCGGCGATGG ACAAGGACCT CTACGATCTG
CCGAAGGAAG AGCTGAAGTC GATCCCGACG GTCTGCGGTT CGCTGCGCGA GGCGCTCGAG
AATCTCGACA AGGACCGCGC CTTCCTCAAG GCCGGCGGCG TGTTCGACGA CGACTTCATC
GACGCCTATA TCGAGCTGAA GATGACCGAA GTGATGCGCT TCGAAATGAC GCCGCACCCG
GTCGAGTTCG AGATGTACTA CTCGCAGTAA
 
Protein sequence
MTTAKEVLKS IKDNDVKYVD LRFTDPRGKW QHVTFDVSMI DEEIFAEGTM FDGSSIAGWK 
AINESDMMLM LDPTTAVIDP FFAETTMVIT CDILEPSTGE PYNRDPRGIA KKAEAQVKAM
GVGDSVFVGP EAEFFVFDDV RYSANPYNTG FKLDSSELPT NSDTEYEGGN LGHRIRTKAG
YFPVPPQDSV QDMRSEMLGA MARMGVKVEK HHHEVASAQH ELGMKFDTLT HMADQMQIYK
YCIHQVAHIY GKTATFMPKP VFGDNGSGMH VHQSIWKDGK PVFAGNKYAD LSETCLHYIG
GIISHAKAIN AFTNPSTNSY KRLVPGYEAP VLLAYSARNR SASCRIPYTT NPKAKRVEVR
FPDPMANPYL AFAAMLMAGL DGIKNKIDPG PAMDKDLYDL PKEELKSIPT VCGSLREALE
NLDKDRAFLK AGGVFDDDFI DAYIELKMTE VMRFEMTPHP VEFEMYYSQ