Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2549 |
Symbol | |
ID | 3910338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2924051 |
End bp | 2925151 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637884447 |
Product | ABC transporter related |
Protein accession | YP_486164 |
Protein GI | 86749668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.071435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGAAG TGAACCTGCG CAAGGTGGTG AAGCGCTACG ACGACGTCGA GGCCGTCCGC GGCATCGATC TCGACATTCC GGACAAGGAA TTCGTGGTGT TCGTCGGCCC GTCCGGCTGC GGCAAGTCGA CGACGCTGCG GATGATCGCC GGGCTCGAGG AAATCTCGGA CGGCGACATC GTGATCGGCG GCGACGTCGT CAACGACGTT CCGCCGAAGG ACCGCGACAT CGCCATGGTG TTCCAGAACT ACGCGCTGTA TCCGCACATG ACGGTCGCCG AGAACATGTC GTTCGGGTTG CGGCTGAAGA AATATCCCAA GGCCGAGATC AAGCAGCGCG TCGACGAGGC GGCGCGGATG CTGGACATCA CCGACCTGAT CCACCGCAAG CCGAAGCAGC TCTCCGGCGG CCAGCGCCAG CGCGTTGCGA TGGGCCGCGC CATCGTCCGC AATCCCAAAG TGTTTTTGTT CGACGAGCCG CTGTCGAATC TCGATGCGCA ATTGCGGGTG CAGATGCGGT TCGAGATCAA GCGGGTGCAC CAGAAGGTGC GCACCACCAC GGTCTACGTC ACCCACGACC AGGTCGAGGC GATGACGCTG GCGGATCGCG TCGTGGTGAT GAACAACGGC CGGATCGAGC AGGTCGGCAC GCCGAACGAG CTGTATCACC GCCCGGCGAC GCGTTTCGTC GCCGGCTTCA TCGGCTCGCC GTCGATGAAT TTCATTCCCT GTACGCTGGA GGACAATGCC GGGCGGCTGC AGATTCGGCT GTCGGACACG CTGGCGATGC CGGTGCCGGA GCAGAAGGCG GCGCATTATC GTGGGCTCGC CCGCGACAAG AAACTGCAGC TCGGCATCCG GCCGGAGCAC ATCGCCGACG CCAGAGCCAC GCTCGAACCC GGCGTCGCGG CGTTCGACGC GCTGCTCGAT ATCACCGAGC CGATGGGGAT GGAGACGCTG ATCTATTTCA ATCTCAACGG CAGCGAGGTC TGCGGCCGGG TCAGCCCGAA TGCCGGGGCG CGGGATGGCG GCATGTTGCG TTTGGCGGTG GACCTCAACA ATATGCACCT GATAGACGAG GGGACCGGCC TCGTGATCTG A
|
Protein sequence | MAEVNLRKVV KRYDDVEAVR GIDLDIPDKE FVVFVGPSGC GKSTTLRMIA GLEEISDGDI VIGGDVVNDV PPKDRDIAMV FQNYALYPHM TVAENMSFGL RLKKYPKAEI KQRVDEAARM LDITDLIHRK PKQLSGGQRQ RVAMGRAIVR NPKVFLFDEP LSNLDAQLRV QMRFEIKRVH QKVRTTTVYV THDQVEAMTL ADRVVVMNNG RIEQVGTPNE LYHRPATRFV AGFIGSPSMN FIPCTLEDNA GRLQIRLSDT LAMPVPEQKA AHYRGLARDK KLQLGIRPEH IADARATLEP GVAAFDALLD ITEPMGMETL IYFNLNGSEV CGRVSPNAGA RDGGMLRLAV DLNNMHLIDE GTGLVI
|
| |