Gene RPB_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2545 
Symbol 
ID3910334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2919419 
End bp2920318 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID637884443 
Producthypothetical protein 
Protein accessionYP_486160 
Protein GI86749664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.281765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CAACTCCCGT CGCCGCGCCG TCGCGCGCCG CGACCAGCGG CCTCGTCCTG 
CTCGCCGTCA CCTCGGTGGC GTGGGGGTTG AGCTGGCCGG TGTCGAAATA CGTGATTTCG
GAATGGCCGC CGCTGCCGGC GCGCGGCCTG CCGGGGCTGG CCGGCTCGCT GCTGCTGTTC
GCCTATGCGG CGCTGCGCGG CGACTCGCTG CTGGTGCCGC GGGCGCTGTG GGGGCGGCTC
GCGGTGTCGG CGTTCTTCAA CGTCACGCTG TGGATGGTGG TGATGGGGCT GGCGCTTTTG
TGGATGCCGG CCGGCGAGAC CGCGGTGATC GGCTATTCGA TGCCGGTGTG GACCGCGCTG
CTGGCGTGGC CGCTGCTCGG CGAGCGGCTG ACGGCGCGGC GCGTGCTGGC GCTGGTGCTG
GGGTTCGGCG GCATCGCCGC GCTGATGGGC GCGGACGGCT TTGCGGCCAG CACCGCGAAG
CTGCCCGGCG TGGCGCTGGC GCTGTCCGGC GCGATCGGCT TCGCGCTCGG CACCATCTTC
CTGAAGCGGT TCCCGATCAA GCTTCCGGGC GCGACCTCGG CGGCGTGGCA GATCGGGCTC
GGCTGCATTC CGGTGACCGC GGTCGGCTTC GCCTTCGAGG TGCCGTCGCT CGACGCGCTG
ACGCCCTATG GCTGGGCGGG GCTCGCTTAT CTGACGCTGA TCCAGTTCTG CCTGGCCTAT
CTGTGCTGGT TCGCCGCATT GCAGCGGCTG TCGGCCTCGG TCGCGGCGAT CGGCACCATG
TCGGTGCCGG TGATCGGCGT GGTGGCGTCG GCGATCGCGC TGCACGAGCC GCTCGGCCTC
AGCCAGATCG CCGCCTTGGT GCTGACGCTC GCCGGCGTCG CGCTGGCGAC GCGATCATAG
 
Protein sequence
MSDPTPVAAP SRAATSGLVL LAVTSVAWGL SWPVSKYVIS EWPPLPARGL PGLAGSLLLF 
AYAALRGDSL LVPRALWGRL AVSAFFNVTL WMVVMGLALL WMPAGETAVI GYSMPVWTAL
LAWPLLGERL TARRVLALVL GFGGIAALMG ADGFAASTAK LPGVALALSG AIGFALGTIF
LKRFPIKLPG ATSAAWQIGL GCIPVTAVGF AFEVPSLDAL TPYGWAGLAY LTLIQFCLAY
LCWFAALQRL SASVAAIGTM SVPVIGVVAS AIALHEPLGL SQIAALVLTL AGVALATRS