Gene RPB_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2539 
Symbol 
ID3910328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2906811 
End bp2907560 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID637884437 
Producthypothetical protein 
Protein accessionYP_486154 
Protein GI86749658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAG AAAGCCCCTT GCAGCCGTAC ACGCTCGACC AATACCTCGC GCCCGATCCC 
TGCATCAGGG ACCCGCTCCC GTCCCCCACC GTGATCCGCC TGCCGCGCGA CACCCGCGCG
AGCCGGAAAA TCGCGCTACG CAGCAAAGGC AGCGCGCGGG CCGGCATCGT CATCGACGAC
CACATCACCT ACGCCGAGTC CCACCTCGAA TTCCAAGCGA TGCTCGCCTA CAGCGCGCAC
CCCGACGTCG TCGAGGTGCG CGAACAGCCG CCTTCGATCG AATACGTCGA CGACGACGGC
GAGGTCCACG ACCACACGTT CGACCTGGCC GTAACCTGCG CCGATGGCCG GCGCGTCGCC
GTCTTCGCAA AGCCCGCCGC CAAGGTCGCC CGCCGCGACA GCGACCGCCA GGTCGAACTC
CTCGCCGCGC AGACACCCCG GGAGTTCGCC GACGAGATCA AACTGCTGAC CGAGAACGAT
CTCACCGACG TCGACCGCTT CAACGCGGCA GCCATCAGGC GCGCTCGGCA GCGACCGGAT
CCGGCAGACG ACGAGGCCAT CCAGCCCATC ATCGACGCGC TCCGCGGCCC CACCACCATC
GGCCACCTGA TGCAGGCCGC CGGGATCGGC AGCTGGAGCT ACGACGCGAT CGTCCGCGCC
GTCGCGGACC GCCGCCTCGT CCTCGTCGAG CACACCGCTC TCGACCACGA CGCCGTCGTC
GAACGTCCCT CCTCCTCGAT CAACCGGTAG
 
Protein sequence
MSGESPLQPY TLDQYLAPDP CIRDPLPSPT VIRLPRDTRA SRKIALRSKG SARAGIVIDD 
HITYAESHLE FQAMLAYSAH PDVVEVREQP PSIEYVDDDG EVHDHTFDLA VTCADGRRVA
VFAKPAAKVA RRDSDRQVEL LAAQTPREFA DEIKLLTEND LTDVDRFNAA AIRRARQRPD
PADDEAIQPI IDALRGPTTI GHLMQAAGIG SWSYDAIVRA VADRRLVLVE HTALDHDAVV
ERPSSSINR