| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2500 |
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| Symbol | |
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| ID | 3910289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2861883 |
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| End bp | 2862818 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884399 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_486116 |
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| Protein GI | 86749620 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.946176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAG CAACGGGTCT CCTGGTAGCG AGCGCGATTT CATTGGCTGC GATCGGAGGA
GCCTGGTCGC AGGCCGCGCC GAAGACCACG GGTGCAACGC CGCAGCCGGC ACCGCCGCAG
GCCGCGCCGG CGCCTGCCCC CGCCAAACAG GCCTGCGCCA ATCCCGACGC GATCGGCGTC
GGTCGCGTGG TCGAGATCGA CACCACGGGC GGCCCGGGAT TCGGATTCGA GCACTTCAAG
CAGCTCGACT TCCTGCGCGA CAAGGAAGTC GTGCTCACCT TCGACGACGG TCCTTGGCCC
AGCAACACCC CGGCGGTGTT GAAGGCGCTG GCCGATCACT GCACCAAGGC GATCTTCTTC
CCGATCGGCA AGCACGCCAC CTATTACCCG GAGATCCTCA AGCAGGTCGC CGCGGCCGGG
CACACCATCG GCGCGCACAC CTGGTCGCAC GCCAACCTCT CGAACAAGAA GCTGACCGAG
GATCAGCGCA AGGACGAGAT CGAGAAGGGC TTCGCAGCCG TGAAATGGGC GCTCGGCAGT
TCGCCGTCGC CGTTCTTCCG CTTCCCGGCG CTGCAACACC CGCCGGAAAT GGTCACCTAT
CTCGGCACCC GCAACGTCTC GATGTTCTCC TGCGATCTGG ACTCGTTCGA CTTCAAGGCA
CGCAAGCCGC AGCAGGTCGT CGACACCGTG ATGACGAAGG TCGACAAGCT CGGCAAGGGC
ATCATCCTGA TGCACGACTT CCAGAAGAGC ACCGCCGAGG CGCTGCCCGA ATTGCTGCGG
CGGCTGAAGC AAGGCGGCTA CAAGGTCGTG CAGATGAAAG CCAAGGCGCC GGTGGTGACG
ATGGCGAAAT ACGAAGAGGA ACTGGCCAAG AGCAACGCCC TGCCGACCGT CAGCACCCGG
CCGGTGAGCT CCGTCGTGCA GACCATCTCC GAGTGA
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| Protein sequence | MRIATGLLVA SAISLAAIGG AWSQAAPKTT GATPQPAPPQ AAPAPAPAKQ ACANPDAIGV
GRVVEIDTTG GPGFGFEHFK QLDFLRDKEV VLTFDDGPWP SNTPAVLKAL ADHCTKAIFF
PIGKHATYYP EILKQVAAAG HTIGAHTWSH ANLSNKKLTE DQRKDEIEKG FAAVKWALGS
SPSPFFRFPA LQHPPEMVTY LGTRNVSMFS CDLDSFDFKA RKPQQVVDTV MTKVDKLGKG
IILMHDFQKS TAEALPELLR RLKQGGYKVV QMKAKAPVVT MAKYEEELAK SNALPTVSTR
PVSSVVQTIS E
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