| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2494 |
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| Symbol | |
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| ID | 3910283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2853544 |
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| End bp | 2854692 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884393 |
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| Product | ribonuclease D |
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| Protein accession | YP_486110 |
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| Protein GI | 86749614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.121397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA TTTCGACCAC TGAGCAGCTC GCCAGCGCCT GCACCCGCCT CGCCAGCCAC
CCCGTCATCA CGGTCGATAC CGAGTTTCTG CGCGAGACCA CCTACTACCC TCTGCTCTGC
GTCGTGCAGA TGGCAAGCCG GGATGAGGCG GTTGTCGTCG ATACGCTGGC ACCCGGGATC
GACCTGAAGC CGTTCTTCGA CCTGATGGCC AACGAGAACG TCCTCAAGGT CTTCCACGCC
GCCCGCCAGG ACATCGAAAT CGTCTGGCAC CGCGCCGGCA TCGTCCCACA CCCGATCTTC
GACACCCAGG TCGCGGCCAT GGTGCTCGGC TATGGCGACA GCATCGCCTA CGACCAGCTC
GTCGAGCGCA TCACCGGCCA CCGTCCGGAC AAGACTCACC GCTTCACCGA CTGGTCGCGC
CGCCCGCTGA CCGACGAGCA GCTGCACTAT GCCGTCTCCG ACGTCACCCA TCTGCGCGAC
GTCTTCGCCG CACTGGATGC GGACCTGAAA CAGCGGGGCC GCAGCGATTG GGTCAGCGAG
GAGATGGAAG TTCTGACCTC GCCGAAAACT TACGACTTCC ATCCCGAAAG TGCCTGGGAG
CGGCTGAAGA CCCGCGTGCG CAAGCCGAAA GAGCTCGCGG TGCTGATGGA GGTGGCGGCC
TGGCGCGAGC AGGAAGCGCA AACCCGCGAC GTGCCGCGCT CGCGCGTGTT GAAGGACGAC
GCGCTCGGCG ACATCGCAAC CCACGCGCCG ACCTCACTCG AGCGGCTCGC CAATCTGCGC
TCGCTGCCGA AGGGGTTCGA CCGCTCGAAA TGGGGTTCCG AGATCGTGGC CGCGGTCCAG
CGCGGTCTGG CGCGAGATCC GCAGACGCTG CCCAAGATCG ACAAGCCGCG GAATAATTCC
AACGGCGGCG CCATCGTCGA ACTGCTCAAA GTATTGCTGC GCATGACGTC CGAGCGCCAC
GCCGTCGCCG CCAAAGTGAT CGCCACCGTC GACGATCTCG AGCAGATCGC CTGCGACGAC
AAGGCCGAAG TCGGGGCGCT GCGGGGGTGG CGACGCGAAT TGTTCGGCGA AGCGGCGCTG
GCGCTCAAGC ACGGCCAGCT CGCGCTCGCG ATCGAGAAGG GCCGCGTGAT CCACGTCGAC
CGCGGCTGA
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| Protein sequence | MDLISTTEQL ASACTRLASH PVITVDTEFL RETTYYPLLC VVQMASRDEA VVVDTLAPGI
DLKPFFDLMA NENVLKVFHA ARQDIEIVWH RAGIVPHPIF DTQVAAMVLG YGDSIAYDQL
VERITGHRPD KTHRFTDWSR RPLTDEQLHY AVSDVTHLRD VFAALDADLK QRGRSDWVSE
EMEVLTSPKT YDFHPESAWE RLKTRVRKPK ELAVLMEVAA WREQEAQTRD VPRSRVLKDD
ALGDIATHAP TSLERLANLR SLPKGFDRSK WGSEIVAAVQ RGLARDPQTL PKIDKPRNNS
NGGAIVELLK VLLRMTSERH AVAAKVIATV DDLEQIACDD KAEVGALRGW RRELFGEAAL
ALKHGQLALA IEKGRVIHVD RG
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