| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2475 |
|---|
| Symbol | ksgA |
|---|
| ID | 3910264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2831435 |
|---|
| End bp | 2832298 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637884374 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_486091 |
|---|
| Protein GI | 86749595 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGA TCGACGGCCT GCCGCCGCTG CGCGACGTCA TCAAGCGTCA CGATCTCGCC
GCGCGAAAAT CGCTCGGCCA GAATTTTCTG CTCGACCTCA ATCTCACCGC CCGGATCGCG
CGCGCCGCCG GCCCGCTGGA CGACGTGACC GTGGTCGAGA TCGGCCCCGG CCCCGGCGGA
TTGACCCGCG CGCTGCTCGC CACCGGCGCG AGGCGCGTGA TCGCGATCGA ACGCGACGAA
CGCGCCCTCG GCGCACTCGA GGAAATCGCG GCGCACTATC CGGGACGGCT GGAGATCGTC
TGCGCCGACG CCATGGAGTT CGACCCCCGG CCTTTGCTCG GCGGAGCACG CGCCAGGATC
GTCGCCAACC TGCCCTACAA CATCGCCACG CCGCTCCTGA TCGGCTGGCT CTGCGCCGAG
CCGTGGCCCC CCTGGTACGA CATGATGGTG CTGATGTTTC AGCGCGAAGT GGCGCAACGC
ATCGTCGCCT GCGAGGACGA CGACGCCTAT GGCCGGCTCG CGGTGCTGTC GAACTGGCGG
TGCGACACCG GGATGCTGTT CGACATCGCG CCCTCCGCCT TCGTGCCGCA GCCGAAGGTG
ACCTCCTCCG TCGTCCGCCT GGTCCCGCGC TCCGCGCCCG AACCATGCAA CCGCGCGGCG
CTGGAGCAGG TCGCCGCCGC CGCCTTCGGC CAGCGCCGCA AGATGCTGCG GCAAAGCCTC
AAGGCGCTCG GCGTCGACCC GGCGCGGCTG GCTGCGGCGG CCGGGATCGA CCCGACACGC
CGCGCCGAGA CCGTCCCGGT TTCCGGCTTT GTTGCCATGG CGAACGAATT GATCGATATA
CGAGATACAA AAAACACACC CTAA
|
|---|
| Protein sequence | MSAIDGLPPL RDVIKRHDLA ARKSLGQNFL LDLNLTARIA RAAGPLDDVT VVEIGPGPGG
LTRALLATGA RRVIAIERDE RALGALEEIA AHYPGRLEIV CADAMEFDPR PLLGGARARI
VANLPYNIAT PLLIGWLCAE PWPPWYDMMV LMFQREVAQR IVACEDDDAY GRLAVLSNWR
CDTGMLFDIA PSAFVPQPKV TSSVVRLVPR SAPEPCNRAA LEQVAAAAFG QRRKMLRQSL
KALGVDPARL AAAAGIDPTR RAETVPVSGF VAMANELIDI RDTKNTP
|
|---|
| |