Gene RPB_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2471 
Symbol 
ID3910260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2827614 
End bp2828501 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID637884370 
Producthypothetical protein 
Protein accessionYP_486087 
Protein GI86749591 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGT CGAGCATGAC GGGGTTTGCG CGCAGCCACG GCAGCAGCGG CCCGTATTCG 
TTTGAATGGG AATTGAAGTC CGTCAACGCC AAGGGCTTCG ATTTCCGGCT GCGCATTCCG
CAGGGGTGGG ACGATATCGA GGCCGGCGTG CGCAAGCGTG CGGCCGAAGC GCTGTCCCGT
GGCACGGTCT ACGCCAACCT CACGGTCAAG CGTGCCGATG CGGCATCGAC CGTGCGCATC
AACGAGGATG TGCTGAACTC GGTCTTGAGG ATCGCGACCG AACTCGCGGG CAGGGTCGAT
GCGGTGGCGC CGAGCATCGA CGGTCTGATG TCGATCAAGG GCGTGATCGA ACTGTTCGAG
CCGGAGGCAG ACGAGGCCGA GGAAAAAGCC GCCCGCGGCG CAGTCGAGGC TGCGTTCACG
CAGGCACTCG GCAGCCTGAT CGAAATGCGC CAGCGTGAAG GCGCGAGCCT CGGCGGTGTG
CTGTCGCAGC GGCTCGACGA GATCGAAACT TTGGCGAAGA AGGCGGAGGC CGCGCCCGGT
CGCAAGCCGG AGGCTATCAA GGCCCGGCTC GCCGAACAGG TCGCGGCGCT GCTGGAGACG
TCGGAGCGTT TCGATCAGGA TCGGCTGCAT CAGGAAGCCA TCATGATGGC GACCAAGGCC
GACATTCGCG AAGAACTCGA CCGCATCGCT TCCCACGTCG CACAGGCCCG CGAGATGCTG
GGCGCGGGCG GCGCCGTCGG CCGTCGGCTC GACTTCCTGT CGCAGGAATT CAATCGCGAG
GTGAACACCT GCTGCTCCAA GTCGATCGAT CTCGAACTGA CCAACACCGG CCTTGCGATG
AAGAACGTGG TCGAGCAGTT CCGCGAGCAA GTGCAGAATC TGGAGTGA
 
Protein sequence
MSLSSMTGFA RSHGSSGPYS FEWELKSVNA KGFDFRLRIP QGWDDIEAGV RKRAAEALSR 
GTVYANLTVK RADAASTVRI NEDVLNSVLR IATELAGRVD AVAPSIDGLM SIKGVIELFE
PEADEAEEKA ARGAVEAAFT QALGSLIEMR QREGASLGGV LSQRLDEIET LAKKAEAAPG
RKPEAIKARL AEQVAALLET SERFDQDRLH QEAIMMATKA DIREELDRIA SHVAQAREML
GAGGAVGRRL DFLSQEFNRE VNTCCSKSID LELTNTGLAM KNVVEQFREQ VQNLE