| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2465 |
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| Symbol | |
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| ID | 3910254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2820847 |
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| End bp | 2822130 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884364 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_486081 |
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| Protein GI | 86749585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG TGAACAATCC CAAACTCAAC TTCATCGAAG CAGCCAACGC CGGGGGGCCG
ATCGTCGAGA CGCGCCTGAT CCGATGGCTG ATCAACGGTC CCAGACCGCA ACCCGACGCC
ATCCTGCGCC GCCTGCTGCT GCAAAGTCAG ACCAAGACGC GCACGCTGCT GATGGCCATG
CTGTCGACGA CGATGTTCAC GATCATCGCG GCGCTGTTGA CGGGGAAGAC CTGGGCCTAT
GCCTGGATTG CGTTCGAGGT GGCCTTCGGC ATTGCGCGCT ACAGTGTCGC GCGAAGGATG
AGCACAGCAC ACGCGTCCGA TCGGCCCGCC GACGGACTGC CAATCTACCT CGGGCTCGCC
TGGGCGCTCA ACTATTCGGT CGGCTGCACG CTCTGCGTCC TGACGGGTCA AGGACCTTTG
ATTCTGCTGA CCGGCATCGT CATCGCGGGG CTTTCCGGGG CCATCTCCTC CCGACATGCC
GGCACGCCGC GCTACGGCAT CGCCCTGATC TGCATTCTGG TGCTGCCATA CACGGTGGCG
ATGGTGTTTT CGCCGATTGC GCAGACCTAC CTGATCGCGC TGCTCATTCC GGGCTGGGGA
GCCGGAATGG CTCTCCTTCT GTTCGAGAAC TACGATGTTC TGCTCCATCT GTTTCTTTCG
GAGCGGGAAA ACAAATGGCT GGCGAACTAC GACCAGCTCA CTGGCCTGCC GAACCGGACC
ATGCAGCATC GGCGCTTCGA CGAGTTGCTC CGCGACGCGA GGGGCGCGCC AGGACGGGAC
GATCAGCCTC TGACGGTGCT CTGCCTCGAC CTCGACGGCT TCAAGGCCGC CAATGACGGC
TACGGCCATG CGGTCGGCGA CGCTGTGCTG GTGGTGGTGG CCGAACGGCT GCGCAGTTGC
GTGCGCGATC ACGACCTCAT CTTCCGGGTC GGCGGCGACG AATTCGTGAT CCTGCTTCCG
GCTGTCTCGG CGATGGAAAG CGCGCCGATC GCCGAGCGGG TGATCGCGCG GATCGCCCAG
CCCTTCGACC TCGGCCAAGA CACCCCGCTC AGCATCGGCG TCAGCATCGG CAGCGCCACT
TTCCCCAACG ACGGCCCGAC TGCCGACGAC CTGTTGCGAT CGGCCGATCA CGCAATGTAC
GAGGCCAAGC GGCGCGGCAG AGGCGTCGTT GTCCACTGCG GTGCCCGCGA CGACGCGATC
GGGCTGGTTC CAATGCCGGA TGCCGACGCC CGCGCGGCGC GCCGGGTTTG GTCCGCGGCA
CACGCCGACA AGGTTGATTC CTGA
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| Protein sequence | MRRVNNPKLN FIEAANAGGP IVETRLIRWL INGPRPQPDA ILRRLLLQSQ TKTRTLLMAM
LSTTMFTIIA ALLTGKTWAY AWIAFEVAFG IARYSVARRM STAHASDRPA DGLPIYLGLA
WALNYSVGCT LCVLTGQGPL ILLTGIVIAG LSGAISSRHA GTPRYGIALI CILVLPYTVA
MVFSPIAQTY LIALLIPGWG AGMALLLFEN YDVLLHLFLS ERENKWLANY DQLTGLPNRT
MQHRRFDELL RDARGAPGRD DQPLTVLCLD LDGFKAANDG YGHAVGDAVL VVVAERLRSC
VRDHDLIFRV GGDEFVILLP AVSAMESAPI AERVIARIAQ PFDLGQDTPL SIGVSIGSAT
FPNDGPTADD LLRSADHAMY EAKRRGRGVV VHCGARDDAI GLVPMPDADA RAARRVWSAA
HADKVDS
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