Gene RPB_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2460 
Symbol 
ID3910249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2816934 
End bp2818079 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID637884359 
Producthypothetical protein 
Protein accessionYP_486076 
Protein GI86749580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.152252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC GAGCGCTCAT TTCAGCGGCG GTGATGCTTC TGATCGCCTC CATCATGCCC 
CCGGCGCGGG CGCAGAACCT CGAAGCCGGC AAGACTCCGG CCCAGCTTTT CGCAGCGACT
TGCGCCGTCT GCCACAAAGG CGCGCGCGGT CTCGTCCGCT CCGTCCCGCC CAACTCTCTG
GCTTCGTTTC TGCGGCAGCA CTACACGACC AGCAGCGACA TGGCTTCGTT GCTCGCAGCC
TATCTGATCT CCAACGGCGC GACCGACACC CGCTACAGGC AGAACGACGT CAGGACTGAT
CCCGGCCAGC AGGACGGCCG ACCGGGTCGC AGGCCGCGTG CGCAGGAGGC CGCGAAGCCC
GAGGCGGGCA AACCCGAGGC TGCCAGGCCC GAGGCCACGG CGCCGGCCGA GGAGGGCACG
CGCCGCAACC GACACAGCAA GCGGCCGCCG AAGCCGGAGG CGGACAAACC CGCCGAAGGG
GCTGCCGCGG AGACCGCTGC GCCCGCAGAG CAACCGCCCG CGAAGGATCA CCGCAAGCAG
AGCCGGAAGG ACAAGCCGGC GAAGAATGCG CCTGCGGGCG CCGAGGCGGC CAAGGGCGAA
GCTGCGAAGC CAGCGCCAGC CGCCAGCGAA CCGACTGCAG CGAAGCCTGA TGCTGCGAAG
CCGGGACCTT CCGCATCTGA AACTTCAAAG CCGGAGACTG TAAAACCGGA GACTGTAAAA
CCGGAGGCTG CAAAGCCGGA GACGTCGAGC TCCGACGCCT CCAAGCCCGG TGTGTCGACA
TCGGATGTCG CCAAGCCGGA CATGCCGAAG GCCGACGACA TCAAGCGCGA GCCGCCGAAA
TCCGACACGT CGAAGCCGGA AGCCGCGCCG GCGGCGCGGG CCACGACGCC GGACGAGGTG
CCACTGCGCG CCGATCCGGT TCCTGCGGTG ACGCCCGCGC CGAAAGCGGC CGACACGCCA
CCGGGGTCCG GGACGGCTCC GCAGACGAAG CCGGCCGAGT CGCCTGCGTC GACGGGCACG
CCCGCGCCGA CGACTAACGC ACCGGCCCCG GCGGTCGCTC CCAGCAGCGA GCCTTCCGTC
ACCGTGACGC CGGTCCCGCC GCCGTCCGAT CAAGGCAGTG CGCCGGATGT ACCGATCTCA
CGGTAG
 
Protein sequence
MTSRALISAA VMLLIASIMP PARAQNLEAG KTPAQLFAAT CAVCHKGARG LVRSVPPNSL 
ASFLRQHYTT SSDMASLLAA YLISNGATDT RYRQNDVRTD PGQQDGRPGR RPRAQEAAKP
EAGKPEAARP EATAPAEEGT RRNRHSKRPP KPEADKPAEG AAAETAAPAE QPPAKDHRKQ
SRKDKPAKNA PAGAEAAKGE AAKPAPAASE PTAAKPDAAK PGPSASETSK PETVKPETVK
PEAAKPETSS SDASKPGVST SDVAKPDMPK ADDIKREPPK SDTSKPEAAP AARATTPDEV
PLRADPVPAV TPAPKAADTP PGSGTAPQTK PAESPASTGT PAPTTNAPAP AVAPSSEPSV
TVTPVPPPSD QGSAPDVPIS R