| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2454 |
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| Symbol | |
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| ID | 3910243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2810662 |
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| End bp | 2812113 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884353 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_486070 |
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| Protein GI | 86749574 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.819464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.726284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG CCTCGCCCTC CTTCGTCTGC CAGAACTGCG GCGCAGCCTT TAACCGCTGG
CAGGGCAAGT GCGAGTCCTG CGGCGAGTGG AATACGCTGG TCGAGGAAGC CGGCGACAGC
GCCGTCCCGG TCAGCATCCG CGCCAAGCGG CGCGGGCGGC CGTTCAAGCT GGAATCGCTC
GCCGGCAAAA GCGTCGACGC GCCGCGCCTG CCCTCCGGCA TGGCCGAACT CGACCGCGTC
ACCGGCGGCG GCTTCGTCCG CGGCTCGGTG CTGCTGGTCG GCGGCGATCC CGGCATCGGC
AAGTCGACGC TGCTGACCCA GGCCACCAGC CTGATGGCGC GCAGCGGCCA TCGCGCGGTG
TACATCTCCG GCGAAGAAGC GGTGGCGCAG GTGCGGCTGC GCGCCGAGCG GCTCGGCCTC
GCCTCCGCGC CGGTCGAACT CGCCGCCGAG ACTTCGGTCG AAGACATCAT CGCAACCCTT
TCTGAAGGCG CGACGCCGCG GCTGATCGTG ATCGATTCGA TCCAGACGAT GTGGACCGAC
ACGGTCGAGT CGGCGCCCGG CACGGTGACG CAAGTGCGCG CCTCGGCGCA GGCGCTGATC
CGCTTTGCCA AGAAGAGCGG CGCGGCGATC ATCCTGGTCG GCCATGTCAC CAAGGACGGC
CAGATCGCCG GTCCGCGCGT GGTCGAGCAC ATGGTCGACG CGGTGCTGTC GTTCGAGGGC
GAAGGCTCGC AGCAGTTCCG CATCCTGCGC GCGGTGAAGA ACCGCTTCGG ACCGACCGAC
GAGATCGGCG TGTTCGAGAT GACCGGGCTC GGCCTGCGCG AAGTCGCCAA CCCGTCGGAG
CTGTTCCTGT CCGAGCGCGA TCTCGGCTCG CCCGGCACCG CGGTGTTCGC CGGCATCGAG
GGCACCCGCC CGGTGCTGGT CGAATTGCAG GCGCTGGTGG CGCCGACCAC GCTCGGCACC
CCGCGGCGCG CGGTGGTCGG CTGGGATTCG GCGCGGCTGT CGATGGTGCT GGCGGTGCTG
GAGGCGCATT GCGGCGTCAA GCTGTCGGGC TACGACGTCT ATTTCAACGT TGCCGGCGGG
CTGCGGATCA ACGAGCCGGC GGCCGATCTC GCCGCAGCAG CAGCGTTGGT GTCGTCGCTG
GCGAATTCAC CGTTGCCGAC CGACGCGGTC TATTTCGGCG AAATCTCGCT GTCGGGCGCG
GTGCGGCCGG TGGCGCAGAC CGCCGCTAGG CTAAAGGAAG CCGCCAAGCT CGGCTTTGCC
CGCGCCATCT TGCCGGAGAC CGCCCGCGGC GACGCGCCGT CCGACGCCGG GATGGCGCTG
CAGACGGTCG GCGGCCTCAC CAGCTTGGTC GCCGACATCG CCGCGCGTGG AACGCCCCGC
CCCGCCGGCC GCGACACTGC GTCTTCGGAG AAAAATGCCA CACCGGCGCG ATTCCGGCGG
CAGGAAGGCT GA
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| Protein sequence | MAKASPSFVC QNCGAAFNRW QGKCESCGEW NTLVEEAGDS AVPVSIRAKR RGRPFKLESL
AGKSVDAPRL PSGMAELDRV TGGGFVRGSV LLVGGDPGIG KSTLLTQATS LMARSGHRAV
YISGEEAVAQ VRLRAERLGL ASAPVELAAE TSVEDIIATL SEGATPRLIV IDSIQTMWTD
TVESAPGTVT QVRASAQALI RFAKKSGAAI ILVGHVTKDG QIAGPRVVEH MVDAVLSFEG
EGSQQFRILR AVKNRFGPTD EIGVFEMTGL GLREVANPSE LFLSERDLGS PGTAVFAGIE
GTRPVLVELQ ALVAPTTLGT PRRAVVGWDS ARLSMVLAVL EAHCGVKLSG YDVYFNVAGG
LRINEPAADL AAAAALVSSL ANSPLPTDAV YFGEISLSGA VRPVAQTAAR LKEAAKLGFA
RAILPETARG DAPSDAGMAL QTVGGLTSLV ADIAARGTPR PAGRDTASSE KNATPARFRR
QEG
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