| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2451 |
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| Symbol | |
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| ID | 3910240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2807391 |
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| End bp | 2808134 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884350 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486067 |
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| Protein GI | 86749571 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.26523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.621505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCCTCGCCTC CCGCATCGCA CTCGTCACCG GCGCTTCGCG CGGCATCGGC
TATGCGACCG CGCGGGCCCT CGCCAGGGCC GGTGCCCATG TCATCGCCGT GGCCAAGACG
CAGGGCGGCC TTGAAGAACT CGACGACGCG ATCCGCGCCG AGGGCGGCCA CGCCGCGACG
CTGGTGCCGC TGGATCTCAC CGACTTCGAT GCGATCGGCC GACTCGGCGC CTCGATCCAC
GAGCGCCACG GCAAGCTCGA CGTGCTGGTC GGCAATGCCG GCATCGCCGG TCCGTCGTCG
CCGCTCGGCC ATATCGAGAT GAAGTCCTGG ACCGGCGTGA TCGGCATCAA CCTCACCGCC
AACTTCCAGC TGATCCGCTG CATGGAGCCG CTGCTGCGGA TGTCGGATGC CGGACGCGCG
GTGTTCCTGA CGTCGCGGGC CGGCGGCAGG GCCCCGGCCT ATCGCGGCCC CTACGCGGCC
TCCAAGGCGG CGCTTGAGAC TTTAGTTCAA GTCTGGGCCA AGGAGGTGGT GAATACCACC
CCGATCCGTA TCAATCTGTT CGATCCCGGC CCCACCCGCA CCAAGCTGCG CGGCACCATC
ATGCCCGGCG AAGACCCTGA AACGCTGCCG TCGCCGGAGC AGATCGCGGA GCTACTGGTA
CCTCTCTGCC TGCCGTCCTG GTCCGAGACC GGCAAACTGT TCGACGCGGC GTCCCGAACC
TTGAAAGACC CCTCCGCCGA TTGA
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| Protein sequence | MTQPLASRIA LVTGASRGIG YATARALARA GAHVIAVAKT QGGLEELDDA IRAEGGHAAT
LVPLDLTDFD AIGRLGASIH ERHGKLDVLV GNAGIAGPSS PLGHIEMKSW TGVIGINLTA
NFQLIRCMEP LLRMSDAGRA VFLTSRAGGR APAYRGPYAA SKAALETLVQ VWAKEVVNTT
PIRINLFDPG PTRTKLRGTI MPGEDPETLP SPEQIAELLV PLCLPSWSET GKLFDAASRT
LKDPSAD
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