Gene RPB_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2431 
Symbol 
ID3909565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2789056 
End bp2789700 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID637884330 
ProductTetR family transcriptional regulator 
Protein accessionYP_486047 
Protein GI86749551 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0857946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGA CGAGGGAACA GAGCCGGCTG GAGACGCGGG AACGGCTGAT TGCTTCGGCC 
CATGCGGCGA TCAGGCGTGA CGGCATCGGC GGTCTGTCGC TGCGCCGGCT GTGCGAGGAG
GCCGGCTATT CCCAGGGCGC GTTCTACTCC AACTTCGCCA GTCGCGACGA CCTGCTGCTG
GTGCTGATGG AGCGACACGT GCTCGGCGAA GTGGAAACGC TTCGGCGCCT GGTCCAGGTG
ATGGACGGCG AGGCTCTGGG CGACGTGCCC GCAACGGTGG CCGCGCGCCT CGCCGATCTG
GCGCAACAGA CCGAATGGTC GCTGCTGTCC ATCGAACTGC AACTGCACGC CCAGCGCGAT
GCCCGCTTCG CCGACGCCTA CAACGCGGCG AAGATCAGCT ATCATGCCGA GTTCGCGCGG
CTGGTCGAGG ACATCCTGCA ACGTCACAAC CTCGCGCCGG CGCTGCCGCC GCTGCAGATC
GGCATCGGTC TCTACGCGCT GTGGTCGGGC CTGGCCGTGC AGGGCACCGT TCCGGGTGCC
GGGCCGCGCG ATGAAATCTT TCTTGCCTTT CTACGCGCCG TGATCGGCGG ATCACCATCG
CCCGCTGACG GGAGACAGCC GTCCGCCGAT CAGTCGGCAT CGTGA
 
Protein sequence
MRKTREQSRL ETRERLIASA HAAIRRDGIG GLSLRRLCEE AGYSQGAFYS NFASRDDLLL 
VLMERHVLGE VETLRRLVQV MDGEALGDVP ATVAARLADL AQQTEWSLLS IELQLHAQRD
ARFADAYNAA KISYHAEFAR LVEDILQRHN LAPALPPLQI GIGLYALWSG LAVQGTVPGA
GPRDEIFLAF LRAVIGGSPS PADGRQPSAD QSAS