Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2431 |
Symbol | |
ID | 3909565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2789056 |
End bp | 2789700 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884330 |
Product | TetR family transcriptional regulator |
Protein accession | YP_486047 |
Protein GI | 86749551 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0857946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAGA CGAGGGAACA GAGCCGGCTG GAGACGCGGG AACGGCTGAT TGCTTCGGCC CATGCGGCGA TCAGGCGTGA CGGCATCGGC GGTCTGTCGC TGCGCCGGCT GTGCGAGGAG GCCGGCTATT CCCAGGGCGC GTTCTACTCC AACTTCGCCA GTCGCGACGA CCTGCTGCTG GTGCTGATGG AGCGACACGT GCTCGGCGAA GTGGAAACGC TTCGGCGCCT GGTCCAGGTG ATGGACGGCG AGGCTCTGGG CGACGTGCCC GCAACGGTGG CCGCGCGCCT CGCCGATCTG GCGCAACAGA CCGAATGGTC GCTGCTGTCC ATCGAACTGC AACTGCACGC CCAGCGCGAT GCCCGCTTCG CCGACGCCTA CAACGCGGCG AAGATCAGCT ATCATGCCGA GTTCGCGCGG CTGGTCGAGG ACATCCTGCA ACGTCACAAC CTCGCGCCGG CGCTGCCGCC GCTGCAGATC GGCATCGGTC TCTACGCGCT GTGGTCGGGC CTGGCCGTGC AGGGCACCGT TCCGGGTGCC GGGCCGCGCG ATGAAATCTT TCTTGCCTTT CTACGCGCCG TGATCGGCGG ATCACCATCG CCCGCTGACG GGAGACAGCC GTCCGCCGAT CAGTCGGCAT CGTGA
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Protein sequence | MRKTREQSRL ETRERLIASA HAAIRRDGIG GLSLRRLCEE AGYSQGAFYS NFASRDDLLL VLMERHVLGE VETLRRLVQV MDGEALGDVP ATVAARLADL AQQTEWSLLS IELQLHAQRD ARFADAYNAA KISYHAEFAR LVEDILQRHN LAPALPPLQI GIGLYALWSG LAVQGTVPGA GPRDEIFLAF LRAVIGGSPS PADGRQPSAD QSAS
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