Gene RPB_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2417 
Symbol 
ID3909551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2769435 
End bp2769866 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637884316 
Producthypothetical protein 
Protein accessionYP_486033 
Protein GI86749537 
COG category[S] Function unknown 
COG ID[COG5349] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000693417 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG TTGTGAATCG TGCACCGATC GTCTGGCCGT CGGACAACGC TCCCGCCGAA 
GATCGCAATG TCTGGCAGGC GATGTGGCGC GGCTTTCGCG GCCGCTGCCC ACAATGCGGC
GAAGGCAAGC TGTTCCGCGG CTTCCTGAAG ACCGCCGACA ACTGCTCGCA TTGCGGTCAG
GATTTCACCG GCCACCGCGC TGACGACCTG CCGGCCTATT TGGTGATCGT CATCGTCGGC
CACATCGTGG TTCCGATCGC GCTGTCGATC GAGACCAATT TCTCGCCGCC GGTGATGTTG
CAGCTCGCGA TCTATCTGCC TATCACGTTG TTCGCATCGC TGGCGCTACT GCAGCCGGTG
AAGGGCGCGG TGGTCGGCTT GCAATGGGCG TTCCGGATGC ACGGCTTCGA CGAGAACAAT
CCTGAGAAGT GA
 
Protein sequence
MKTVVNRAPI VWPSDNAPAE DRNVWQAMWR GFRGRCPQCG EGKLFRGFLK TADNCSHCGQ 
DFTGHRADDL PAYLVIVIVG HIVVPIALSI ETNFSPPVML QLAIYLPITL FASLALLQPV
KGAVVGLQWA FRMHGFDENN PEK