Gene RPB_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2403 
Symbol 
ID3909537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2757053 
End bp2757514 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID637884302 
Producthypothetical protein 
Protein accessionYP_486019 
Protein GI86749523 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0181895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.750924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA CCGATGACAT CCGCGAAGGT GAAGTCACCG TCACGCCGCC ACCGCCGACC 
GACGCCGGTC TGGTGTTCAT CGGCCGGATT CGCACGCCGT GGAGGTCGCG CGGCGAGACG
CCGCGGCAGG GCAGTCCCGA CGGTCCGGTG TGCCGGCTGG AGATTTTCGA GCCGTGGACC
GCGGCGCTCG CCGGCCTCGA TAGGTTCACG CAGGTGCAGG TGGTCTATTG GCTGCACCAG
TCGCGCCGCG ATCTGGTGAT CCAGCGCGGC CACGGCATCG ACGGCCCCCG CGGCACCTTT
GCGTTGCGCT CGCCGGTGCG GCCGAACCCG ATCGGGATTT CGTCGGCGGC TCTGGTCGGG
ATCGAGGGAT CGACGGTGCT GGTGCGCGGG CTCGATTGTC TCGACGAAAC GCCGCTGATC
GACCTCAAGC CCGACCGCTG CGTGCATTCG ATGGCGAAGT AA
 
Protein sequence
MIATDDIREG EVTVTPPPPT DAGLVFIGRI RTPWRSRGET PRQGSPDGPV CRLEIFEPWT 
AALAGLDRFT QVQVVYWLHQ SRRDLVIQRG HGIDGPRGTF ALRSPVRPNP IGISSAALVG
IEGSTVLVRG LDCLDETPLI DLKPDRCVHS MAK