Gene RPB_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2400 
Symbol 
ID3909534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2755386 
End bp2755745 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID637884299 
Producthypothetical protein 
Protein accessionYP_486016 
Protein GI86749520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.93992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.497103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GGCGCAGCAG TTCACGACGA CGGGTCTATT ACGGCGGACG GCTCGCCTTC 
CAGGCCCGAA CAGCAACGAT CGACTGTATC GTCCGCAATC TGTCGGCGGA GGGAGCCCAG
ATCGAGTTCG ACAATCCGGC CGCCGTGCCG GACCGCGTGG ACCTGGTGAT CGCGCGCAAG
AGCATCGCTT ATCGCGGCCG GATCGTCTGG CGGCGTGAAA ACCGCGCCGG TCTTTGGCTG
GACGCGCCGC GGCGACAACC CTCCGAGCTG CCGCTCGACC TCGCGCTGCG CATCCGGGCC
ACCGAGCGCG TCAACGTGCA ATTGCGCGCC AGGTTGGCGC AACTGCGGTC CGAATTCTGA
 
Protein sequence
MFERRSSSRR RVYYGGRLAF QARTATIDCI VRNLSAEGAQ IEFDNPAAVP DRVDLVIARK 
SIAYRGRIVW RRENRAGLWL DAPRRQPSEL PLDLALRIRA TERVNVQLRA RLAQLRSEF