| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2393 |
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| Symbol | |
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| ID | 3909393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2744538 |
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| End bp | 2746259 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884292 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_486009 |
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| Protein GI | 86749513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0818028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.363702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCA ACACCTATGT CAGCTCGCGG GTCTTGCGAG TATGCGTACT CGGTCTGGCC
ACCATCGCGG GCGCGGTCAT CGCCACCACC GACACGGCCG ACGCACGGCG AAAACACCGT
CGACATCACG TCGAGCGCAA CAGCTACAAT CCGGCCTTCG CCTCGATCAT CGTCGACGCC
AATACCGGCG CCACGCTGAG CGCGACCAAT CCCGACGCCG TGCGCCATCC CGCGTCGCTG
ACCAAGATCA TGACGCTGTA TCTGCTGTTC GAGCGGCTGG AGGCGGGCAA GCTGTCGCTC
GACAGCGAGA TGGAGGTGTC GGCGCATGCG TCGTCGCAAG CGCCGACCAA GCTCGGTCTG
CGCCCCGGCC AGACGCTGCG CGTCGAAGAC GCGATCAAGG CCCTCGTCAC CCGTTCCGCC
AACGACGCTG CCGTGGTGAT CGCCGAAACC GTCGGCGGCA GCGAAGCCGA GTTTGCCAGG
ATGATGACGC GGAAGGCGCG CGCCCTCGGA ATGTCCCGGA CCGTCTACCG CAACTCCAAC
GGCCTGCCGA ACGACGACCA GGTGACTACC GCGCGGGACC AGTCGATCCT CGGCCGCGCG
ATCCAGGACC GCTTCCCGCG CTATTACCGC TACTTCGCCA CCACCACGTT CAACTACCGT
GGCGCGTCGA TCCGAAATCA CAATCGCCTG CTCGGCAATG TCGAAGGCGT CGACGGCATC
AAGACCGGCT ACACCCGCGC GTCAGGCTTC AACCTCGTCA CCTCGATGCA CCGCGGCAAC
CGCTTCCTCG TCGGCGTTGT GCTGGGCGGT CGCAGCGGTG GTTCGCGCGA CGCGATCATG
CGCAACCTGC TCGCTGAAAA TCTGGAGAAG GGCGCGACAA GGCGCACCGT CGCTGCGATC
GTCGAACGCT CGCCGTCGTC GACGCAGGTC GCAGAAGACA TGCCGGACAG CCGCCCATCG
CCGACCGTCC AGGTCCAGGG CGCCGTTCAG GTCGCATCGG CCGCGCCGGA GCCGATCGAG
ACGGTCGCCC GCCCGGCCCC GCCCGCGCCG ATCACCCGCG CGATCGCAAC GCGGCCCGAG
AAGCCCGAGC CCGGCCCGTT TAACAGCGGC ACGATCGAGA CCAAGCCGCT GTCGCTGATC
CCGGGGTCGT CGGAGCCGAT GAAGCCGGTC CGGGTGAAGA CCGTTCAGGT CAAATCGGCG
CCGATCAAGC TCGCCTCCGC CGTCGCCGCG CCGCCCGTGA CCAACACCAT CCCGCCGGCC
CGCCGCGAGA TCGCCGAAAC CTCCACCGCC GCCATCACCA GGGCCGAGCT GGTGCAGCAG
CCGGCCAATC ACGGCACCGG CAATGGCATC CTCGGCGTCC TGCCGGCATC CCGAGTGGCG
CCGTCGAACG CCCAGGCGAT GGCCGCGGTC GAGCCGACGC CCGCGCCGAC GTCCAGCGCG
GTTCAGCAGA ACGGAGCGAT CAAGTCGGTG ACCCACACCG GCTGGATCAT CCAGGTCGGC
GCGCTGGAGA GCGAGAGCGA AGCCAAGGCC CGGCTCGAAG CCGCGCGCGA TCAGGCCCGC
GGCATGCTCG GCAAGGCCGA TCCGTTCACC GAGACGGTGG TGTCCAAGGG CGATCGCAAG
CTGTATCGCG CCCGCTTCGC CGGGCTCGGT CGCGATGAAG CCGAAGCGGT GTGCCGCAAG
CTGAAGCGCT CGGACATCTC CTGCTTCACC ATCAAGAACT GA
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| Protein sequence | MHRNTYVSSR VLRVCVLGLA TIAGAVIATT DTADARRKHR RHHVERNSYN PAFASIIVDA
NTGATLSATN PDAVRHPASL TKIMTLYLLF ERLEAGKLSL DSEMEVSAHA SSQAPTKLGL
RPGQTLRVED AIKALVTRSA NDAAVVIAET VGGSEAEFAR MMTRKARALG MSRTVYRNSN
GLPNDDQVTT ARDQSILGRA IQDRFPRYYR YFATTTFNYR GASIRNHNRL LGNVEGVDGI
KTGYTRASGF NLVTSMHRGN RFLVGVVLGG RSGGSRDAIM RNLLAENLEK GATRRTVAAI
VERSPSSTQV AEDMPDSRPS PTVQVQGAVQ VASAAPEPIE TVARPAPPAP ITRAIATRPE
KPEPGPFNSG TIETKPLSLI PGSSEPMKPV RVKTVQVKSA PIKLASAVAA PPVTNTIPPA
RREIAETSTA AITRAELVQQ PANHGTGNGI LGVLPASRVA PSNAQAMAAV EPTPAPTSSA
VQQNGAIKSV THTGWIIQVG ALESESEAKA RLEAARDQAR GMLGKADPFT ETVVSKGDRK
LYRARFAGLG RDEAEAVCRK LKRSDISCFT IKN
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