Gene RPB_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2382 
Symbol 
ID3909382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2735617 
End bp2736411 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID637884281 
Producthypothetical protein 
Protein accessionYP_485998 
Protein GI86749502 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.371494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.708351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCG TGCTGTCCAA AATCCTCGGC TTCTTCATCC ACCCTTCCAA CACCATCGCG 
GTGATCTGCG CGGTCGGCGT GCTGATGTTG CTGACGCGGT GGCGGCGAGC GGGCGCGCGG
GTGCTGGGCG TGGGCGTCGT GCTGCTGCTG ATCGCCGGCT ACTCGCCGCT CGGCAGCGTG
CTGCTGCTGA GTTTGTCGGA GCGCTTCCCG CCGTGGCAAT TCAGCGGTCG CGCCCCGGAC
GGCATCATCG TGCTCGGTGG TGCGATCGAC TCCGAGGTCA GCGCCGCGCG CGACGCGGTC
GAGCTCGATT CTTCGGCGGA GCGCGTCATG GCCGCGCTCG AACTGGCGCG GGACTATCCG
CAGGCGCGGA TCGTCTACAG CGGCGGCAGC GGCAATCTGA TCCAGAATTC GGTCGCCGAG
GCGCCGATCG CGGCCGATCT ATTCGCGCGC TTCGGCGTCG CGCCGGATCG TTTCGTAGTG
GAGAGCCGAT CGCGCACGAC GGCGGAGAAT GCCAGCTTCA CGCGCGAGCT GGTCTCGCCG
AAGCCCGGCG AAGTATGGCT GCTGGTGACC TCGGCGTTCC ACATGCCGCG CTCGATCACC
GCGTTCCGCG CCGCCGGCTT CGACGTGACG GCTGCTCCGG TGGATTGGCG GACGCGGGGC
TGGGGCGATG CCGCACGGCC ATTCGACCGG CTCAGCAGCG GTCTCGCGCG CACCGACGTC
GCCGCCCATG AATGGGCGGG GCTGTTGGCC TATCGGCTGA GCGGCCGGAC CACGAGCCTG
CTGCCATCGC CGTAG
 
Protein sequence
MFFVLSKILG FFIHPSNTIA VICAVGVLML LTRWRRAGAR VLGVGVVLLL IAGYSPLGSV 
LLLSLSERFP PWQFSGRAPD GIIVLGGAID SEVSAARDAV ELDSSAERVM AALELARDYP
QARIVYSGGS GNLIQNSVAE APIAADLFAR FGVAPDRFVV ESRSRTTAEN ASFTRELVSP
KPGEVWLLVT SAFHMPRSIT AFRAAGFDVT AAPVDWRTRG WGDAARPFDR LSSGLARTDV
AAHEWAGLLA YRLSGRTTSL LPSP