Gene RPB_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2381 
Symbol 
ID3909381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2734722 
End bp2735540 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID637884280 
Product2,5-didehydrogluconate reductase 
Protein accessionYP_485997 
Protein GI86749501 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.308673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.442759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG TTGAAGCCCA TGGCGCGAAA ATTCCCGCGA TCGGACTCGG CACCTGGGAG 
CTGAGCGGCC ATTCCTGCGC CCGCATCGTC GAGCAGGCGA TCCGGCTCGG CTATCGCCAC
ATCGACACCG CGCAGGTCTA CTACAACGAA CGCGACGTCG GCGAGGGCAT CCGCAATTCG
CACATCAGGC GCAGCGAGAT GTTCGTCGCC ACCAAGGTCT GGACGACGCA TTTCGCGCCC
AACGATCTGC TCCGCTCGAC CAAAGAGAGC CTGCACAAGA TGCGGCTGTC GGAGGTCGAC
CTGCTGATGC TGCACTGGCC GAACGCGCAT GTGCCGCTGA ACGAAACGCT CGGCGCACTC
GCGCACGCCA GAGAACTCGG CATGACGCGG CATATCGGCG TGTCGAATTT CACCGTGGCG
CTGCTGAAGC AGGCGGTCGC GCTCTGTCCG GAACCGCTGG TGTGCAATCA GGTCGAGTAT
CATCCGTTTC TCGGCCAGAG CAATTTGCTG GCGGCCTGCG CCGAACTCGG CATCGCGATG
GTCGCCTACA GCCCGATCGC CAAGGGCACC GCGCGGCAGA GCGAGGTGCT GACCCGGATC
GGGGCAGCGC ACGGCAAGTC GCCCTCGCAG GTGTGCCTGC GCTGGCTGGT GCAGCAGAAC
GTTCCGGCGA TCCCGCGCAC CTCGCGGATC GAGCGCCTCT CGCAAAACAT CGACGTCTTC
GACTTCGTGC TCAGCGACGA CGAGATGCGC GAGATCTTTG CGCTGGGCAG CCCCGAGGGC
CGGCTGGTGC ATTCGGTCAC CGAGCCGGAT TGGGACTGA
 
Protein sequence
MQFVEAHGAK IPAIGLGTWE LSGHSCARIV EQAIRLGYRH IDTAQVYYNE RDVGEGIRNS 
HIRRSEMFVA TKVWTTHFAP NDLLRSTKES LHKMRLSEVD LLMLHWPNAH VPLNETLGAL
AHARELGMTR HIGVSNFTVA LLKQAVALCP EPLVCNQVEY HPFLGQSNLL AACAELGIAM
VAYSPIAKGT ARQSEVLTRI GAAHGKSPSQ VCLRWLVQQN VPAIPRTSRI ERLSQNIDVF
DFVLSDDEMR EIFALGSPEG RLVHSVTEPD WD