Gene RPB_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2380 
Symbol 
ID3909380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2734243 
End bp2734644 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content68% 
IMG OID637884279 
ProductXRE family transcriptional regulator 
Protein accessionYP_485996 
Protein GI86749500 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.740526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.410839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCGGG CTGAAGTAAC GACTGGGGAG CAACCGCGTC TTCATCGGCT GTTAACGTCG 
AAGGTCGACC ATCGCCCGAT GGTCAATCAG TTGCAGCGGC TGCGCCTGAA GGCGGATGGA
CGGATCGTCG AACTGCGCGA CGGGCAGGAA TTTCCGCTGT CGCCGGCGGC TCCGGAGCCA
GCGACGCCCG CGGTGCGCGA TCTACGCCGG CGCGCCCGAT TGACGCAAAC CGAATTCGCG
GACCGGCTCG GCGTTCCGGT CGATACCATC CGGAACTGGG AGCAGGGCAA GCGCCTGCCG
CGCGGTCCGG CGCGGGCGCT GCTGTCCGTC ATCGCGCATG CGCCCGATAC GGTATTCGCG
GCGCTGGCGG GAGCCGGCGC TGCGGATTCG ACGGCCTCGT AA
 
Protein sequence
MVRAEVTTGE QPRLHRLLTS KVDHRPMVNQ LQRLRLKADG RIVELRDGQE FPLSPAAPEP 
ATPAVRDLRR RARLTQTEFA DRLGVPVDTI RNWEQGKRLP RGPARALLSV IAHAPDTVFA
ALAGAGAADS TAS