Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2373 |
Symbol | |
ID | 3909373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2727053 |
End bp | 2728423 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637884272 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_485989 |
Protein GI | 86749493 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.351814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.619069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC GCAGGCCGCG CAGCCTTCTC ACCCAGGTGG CGCTGCTCAG CTTCGCAGCG CTCCTCGTCG CCCAGTTCGT CAGTTTCTGG CTGTTCACAG CCGACCACGC CAAGCGGATT CGCGTCGCCC AGCGCATCGA GGTGGTCGAA CGCGTCGCCG CCGTCGCCGC ATTGCTGGAC AAGGCCCCGG CGACGGCGCG CGACGACCTG CTCGAAGCGG CCAGTTCACG CTCGACACGG TTCGAGGTGG CCACGGCACC GACCGTCGAT CGGCCCGTCG ACCTGCTCGG GTCCGATTGC GGCCAGCGCG ATTGCGCCGA TCTCGGCTTG CCCGCGGGAC TGCGGATGCA AGAGGACTTC GTTTCGCCGC GTGATGGCGG CCGGTTCAGC GATCCGCCAC CCCGGTTCCG CGATCGGCTC GTGAAATCCA ACCTGGCACC GGTCGCGTTC AAGCTGTCGC TGCCGCTGCG CGACGCGCAG TGGCTCAACG TCACCTCGCG CTTCGAGCGG CCGGCCATTC AACTGCCCCC GCAGGTGATG GGCACCACGC TGGTTTCGCT GGCGCTGGTG CTGGCGGCGC TGTGGTTCGC GCTGCGGCGC GTCACCCGGC CGCTCGATCA GCTCGCCTCG GCGGCCGACG GGTTCGGCCT CGACGCCCCG CCTCCCCGGA TGCCGACCGG CGGACCGCGC GAAGTCCGTG CGCTGTCGGA TGCGCTGGCG CGGATGCACG AGCGGCTGGC GCGGATGCTG GGAGAGCGCA CGAGGATGCT GGCGGCGCTC GGCCACGATC TGCGCTCGCC GATCACCGCG CTGCGCGTCC GCGCCGAAAT GGTCGACGAC GCCGAGAACA AGGAGCGGAT GATCGCGACG CTCGACGAGA TGCAGCAGAT GGTGGAAGCC ACGCTGGCCT TCGCCCGCGG CGTCTCGACC GACCAGCCGA CCGAACCTGT CGACCTCGCC GCGCTGGCGT CGGAGCTGGC CGCCGAGCTG AGCGCGATCG GACCACCGAT CCGGATCACG TCGGCAACCC CGATCGTGCT GCCGCTGCGG CGCGTGCCGC TGCGGCGCGC GCTGCGCAAC ATCCTGGAAA ACGCCCAGCG CTATGGCGGC GGCGCCGAGG TTCGGGTCGA GCAAGACGGC ACCGAAGTCC GAATGGTGAT CGAGGATCGC GGCCCCGGTC TGCCGGACAG TGACCTCACG CGGGTGTTCG AACCGTTCGT CAGGCTGGAG ACCTCACGGT CGCGGGAAAC CGGCGGCACC GGTCTCGGCC TGCCGATCGC GCGCGCCATT CTGCAGGCGC ACGGCGCCAC CATCGCCTTG GCCAACCGGC CCGAAGGCGG TCTGCGCGCG ACGGTGACGT TCGCAGGATA G
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Protein sequence | MSRRRPRSLL TQVALLSFAA LLVAQFVSFW LFTADHAKRI RVAQRIEVVE RVAAVAALLD KAPATARDDL LEAASSRSTR FEVATAPTVD RPVDLLGSDC GQRDCADLGL PAGLRMQEDF VSPRDGGRFS DPPPRFRDRL VKSNLAPVAF KLSLPLRDAQ WLNVTSRFER PAIQLPPQVM GTTLVSLALV LAALWFALRR VTRPLDQLAS AADGFGLDAP PPRMPTGGPR EVRALSDALA RMHERLARML GERTRMLAAL GHDLRSPITA LRVRAEMVDD AENKERMIAT LDEMQQMVEA TLAFARGVST DQPTEPVDLA ALASELAAEL SAIGPPIRIT SATPIVLPLR RVPLRRALRN ILENAQRYGG GAEVRVEQDG TEVRMVIEDR GPGLPDSDLT RVFEPFVRLE TSRSRETGGT GLGLPIARAI LQAHGATIAL ANRPEGGLRA TVTFAG
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