Gene RPB_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2373 
Symbol 
ID3909373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2727053 
End bp2728423 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content71% 
IMG OID637884272 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_485989 
Protein GI86749493 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.351814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.619069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC GCAGGCCGCG CAGCCTTCTC ACCCAGGTGG CGCTGCTCAG CTTCGCAGCG 
CTCCTCGTCG CCCAGTTCGT CAGTTTCTGG CTGTTCACAG CCGACCACGC CAAGCGGATT
CGCGTCGCCC AGCGCATCGA GGTGGTCGAA CGCGTCGCCG CCGTCGCCGC ATTGCTGGAC
AAGGCCCCGG CGACGGCGCG CGACGACCTG CTCGAAGCGG CCAGTTCACG CTCGACACGG
TTCGAGGTGG CCACGGCACC GACCGTCGAT CGGCCCGTCG ACCTGCTCGG GTCCGATTGC
GGCCAGCGCG ATTGCGCCGA TCTCGGCTTG CCCGCGGGAC TGCGGATGCA AGAGGACTTC
GTTTCGCCGC GTGATGGCGG CCGGTTCAGC GATCCGCCAC CCCGGTTCCG CGATCGGCTC
GTGAAATCCA ACCTGGCACC GGTCGCGTTC AAGCTGTCGC TGCCGCTGCG CGACGCGCAG
TGGCTCAACG TCACCTCGCG CTTCGAGCGG CCGGCCATTC AACTGCCCCC GCAGGTGATG
GGCACCACGC TGGTTTCGCT GGCGCTGGTG CTGGCGGCGC TGTGGTTCGC GCTGCGGCGC
GTCACCCGGC CGCTCGATCA GCTCGCCTCG GCGGCCGACG GGTTCGGCCT CGACGCCCCG
CCTCCCCGGA TGCCGACCGG CGGACCGCGC GAAGTCCGTG CGCTGTCGGA TGCGCTGGCG
CGGATGCACG AGCGGCTGGC GCGGATGCTG GGAGAGCGCA CGAGGATGCT GGCGGCGCTC
GGCCACGATC TGCGCTCGCC GATCACCGCG CTGCGCGTCC GCGCCGAAAT GGTCGACGAC
GCCGAGAACA AGGAGCGGAT GATCGCGACG CTCGACGAGA TGCAGCAGAT GGTGGAAGCC
ACGCTGGCCT TCGCCCGCGG CGTCTCGACC GACCAGCCGA CCGAACCTGT CGACCTCGCC
GCGCTGGCGT CGGAGCTGGC CGCCGAGCTG AGCGCGATCG GACCACCGAT CCGGATCACG
TCGGCAACCC CGATCGTGCT GCCGCTGCGG CGCGTGCCGC TGCGGCGCGC GCTGCGCAAC
ATCCTGGAAA ACGCCCAGCG CTATGGCGGC GGCGCCGAGG TTCGGGTCGA GCAAGACGGC
ACCGAAGTCC GAATGGTGAT CGAGGATCGC GGCCCCGGTC TGCCGGACAG TGACCTCACG
CGGGTGTTCG AACCGTTCGT CAGGCTGGAG ACCTCACGGT CGCGGGAAAC CGGCGGCACC
GGTCTCGGCC TGCCGATCGC GCGCGCCATT CTGCAGGCGC ACGGCGCCAC CATCGCCTTG
GCCAACCGGC CCGAAGGCGG TCTGCGCGCG ACGGTGACGT TCGCAGGATA G
 
Protein sequence
MSRRRPRSLL TQVALLSFAA LLVAQFVSFW LFTADHAKRI RVAQRIEVVE RVAAVAALLD 
KAPATARDDL LEAASSRSTR FEVATAPTVD RPVDLLGSDC GQRDCADLGL PAGLRMQEDF
VSPRDGGRFS DPPPRFRDRL VKSNLAPVAF KLSLPLRDAQ WLNVTSRFER PAIQLPPQVM
GTTLVSLALV LAALWFALRR VTRPLDQLAS AADGFGLDAP PPRMPTGGPR EVRALSDALA
RMHERLARML GERTRMLAAL GHDLRSPITA LRVRAEMVDD AENKERMIAT LDEMQQMVEA
TLAFARGVST DQPTEPVDLA ALASELAAEL SAIGPPIRIT SATPIVLPLR RVPLRRALRN
ILENAQRYGG GAEVRVEQDG TEVRMVIEDR GPGLPDSDLT RVFEPFVRLE TSRSRETGGT
GLGLPIARAI LQAHGATIAL ANRPEGGLRA TVTFAG