| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2352 |
|---|
| Symbol | |
|---|
| ID | 3909350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2702547 |
|---|
| End bp | 2703407 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884249 |
|---|
| Product | MaoC-like dehydratase |
|---|
| Protein accession | YP_485968 |
|---|
| Protein GI | 86749472 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.137792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.739799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCC GTTACGACGA ACTCATGGCC CTCGAGGCGA TCGGCCAGAA CTACGCCTAC
ACCGATCGCG ACGTGATGCT CTATGCCTAC GGCATCGGCA TGGGCGCCGA TCCGATGGAT
GAGCGCGAAC TCGCCTTCGT CAACGAGGCG ACCTACACCG AGCGGCCGCT GAAAGTGGTG
CCGACCTTCG CCTCGGTCGC GGCATGGGGC GCGGGCCCCG GCGAGATGAA TCTCAATCGC
CTGCTGGTCG TCGACGGCGA GCGCGACATC ACCTTTCATC GGCCGATGCC GGTGGCTGCG
AAGATCACCG CCGATTCAAC CGTCGTGCAG GTCTACGACA AGGGCAAGGA CAAGGGCGTG
GTGATCCGTC ACCAGACCAT CCTGCGCGAC GAGGCCGGCG CCGAGCTGGC GACGCTGCTG
GCGTCGCGCT TCGCCCGCGG CGACGGCGGC TTCGGCGGCC CGGCGCTGGA GCAGCCCGAG
CCGCACAAGA TGCCGAGCCG CGCGCCGGAT CGCTCGGTCG ATATCACCAC CCGGCCGGAT
CAGGCGCTGA TCTATCGGCT GTGCGGCGAC CGCAACCCGC TGCACTCCGA TCCGGAATTC
GCCCAGAAAG CCGGGTTCCC GCGGCCGATC CTGCACGGCA TGTGCACTTA CGGCATCACC
TGCCGCGGCG TGCTGCAGAC CTATGCGGAT TACGACGCCT CGGCGTTCCG GCAGCACGCC
GTGCGGTTCT CGTCGCCGGT CTATCCGGGC GAGACCGTCA CGATGGATTT GTGGAAGGAC
GGCAATGTGA TCTCGTTCGA GGCCAAGGTG AAGGCGCGCG ACGTCACCGT GATCAAAAGC
GGCCGGAGCG TGCTGGGCTA G
|
|---|
| Protein sequence | MSARYDELMA LEAIGQNYAY TDRDVMLYAY GIGMGADPMD ERELAFVNEA TYTERPLKVV
PTFASVAAWG AGPGEMNLNR LLVVDGERDI TFHRPMPVAA KITADSTVVQ VYDKGKDKGV
VIRHQTILRD EAGAELATLL ASRFARGDGG FGGPALEQPE PHKMPSRAPD RSVDITTRPD
QALIYRLCGD RNPLHSDPEF AQKAGFPRPI LHGMCTYGIT CRGVLQTYAD YDASAFRQHA
VRFSSPVYPG ETVTMDLWKD GNVISFEAKV KARDVTVIKS GRSVLG
|
|---|
| |