Gene RPB_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2318 
Symbol 
ID3908949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2666791 
End bp2667180 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content68% 
IMG OID637884215 
Product30S ribosomal protein S11 
Protein accessionYP_485934 
Protein GI86749438 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.411932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAGCCGGCCG CATTCGCCGC CGCGAGCGCA AGAACATCGC CTCTGGCATT 
GCGCATGTGA ACTCGTCGTT CAACAACACG ACCATCACCA TCACCGACGC GCAGGGCAAT
GCGATCGCCT GGTCGTCGGC CGGCACGATG GGCTTCAAGG GCTCGCGCAA GTCGACCCCC
TACGCCGCGC AGGTCGCGGC CGAGGACGTC GCCAAGAAGG CGCAGGAGCA CGGCATGCGC
ACCCTCGAAG TCGAGGTCGC CGGTCCGGGT TCGGGCCGCG AATCGGCGCT GCGCGCGCTG
CAGGCGTCGG GTTTCACGGT GACCTCGATC CGTGACGTCA CCACGATCCC GCACAACGGC
TGCCGGCCGC GCAAGCGGCG TCGGGTCTGA
 
Protein sequence
MAKEAGRIRR RERKNIASGI AHVNSSFNNT TITITDAQGN AIAWSSAGTM GFKGSRKSTP 
YAAQVAAEDV AKKAQEHGMR TLEVEVAGPG SGRESALRAL QASGFTVTSI RDVTTIPHNG
CRPRKRRRV