| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2304 |
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| Symbol | rpsQ |
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| ID | 3908935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2658883 |
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| End bp | 2659131 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637884201 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_485920 |
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| Protein GI | 86749424 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000928394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.101475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAAGA GGACCCTGCA GGGCGTGGTC GTCAGCGACA AGCAAGCCAA GACCGTGGTG
GTGCGCGTCG ACCGTCGCTT CACCCACCCG ATCTACAAGA AGACGATCCG GCGCTCGAAG
AACTACCACG CGCACGACGA GAACGATCAG TTCCATCCGG GCGACATGGT GTGGATCGAG
GAGAGCAAGC CGATCTCCAA GTTGAAGCGC TGGACCGTGG TCCGGGGCGA ACCGAAGAAG
ACCGCCTAA
|
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| Protein sequence | MPKRTLQGVV VSDKQAKTVV VRVDRRFTHP IYKKTIRRSK NYHAHDENDQ FHPGDMVWIE
ESKPISKLKR WTVVRGEPKK TA
|
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