Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2301 |
Symbol | rpsC |
ID | 3909682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2657511 |
End bp | 2658209 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884198 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_485917 |
Protein GI | 86749421 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.371999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.117163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAAA AGATCAATCC GATCGGGCTG CGGCTGGGCA TCAACCGGAC GTGGGATTCC CGTTGGTTCG CCGGCAAGAA CGAGTACGGC AAGCTGCTGC ACGAGGACGT CAAGATCCGT GAGATCCTGC ACAAGGAATT GAAGCAGGCC GCGGTGGCGC GCATCGTGAT CGAGCGCCCG CACAAGAAGT GCCGGGTGAC GATCCACTCC GCGCGCCCGG GCGTCGTGAT CGGCAAGAAG GGCGCCGACA TCGACAAGCT GCGCAAGAAG GTCGCCGACA TCACCGCGTC GGACGTCGTC ATCAACATCG TCGAAATCCG CAAGCCGGAG CTCGACGCCA CGCTGGTCGC CGAATCGATC GCGCAGCAGC TCGAGCGCCG CGTCGCGTTC CGCCGCGCGA TGAAGCGGGC GGTGCAGTCG GCGATGCGTC TCGGCGCCGA GGGCATCCGG ATCAACTGCT CGGGCCGTCT CGGCGGCGCC GAAATCGCGC GCATGGAGTG GTATCGCGAA GGTCGCGTGC CGCTGCACAC GCTGCGCGCC GACATCGATT ACGGCGTCGC GACCGCGTTC ACCACCTTCG GCACCTGTGG CGTCAAGGTG TGGATCTTCA AGGGCGAGAT CCTCGAACAC GATCCGATGG CGCAGGACAA GCGTATGGCC GAAGGCGACA ATTCCCGCCC GCGCCGCGAC GCTGCCTGA
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Protein sequence | MGQKINPIGL RLGINRTWDS RWFAGKNEYG KLLHEDVKIR EILHKELKQA AVARIVIERP HKKCRVTIHS ARPGVVIGKK GADIDKLRKK VADITASDVV INIVEIRKPE LDATLVAESI AQQLERRVAF RRAMKRAVQS AMRLGAEGIR INCSGRLGGA EIARMEWYRE GRVPLHTLRA DIDYGVATAF TTFGTCGVKV WIFKGEILEH DPMAQDKRMA EGDNSRPRRD AA
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