Gene RPB_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2300 
SymbolrplV 
ID3909681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2657101 
End bp2657487 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID637884197 
Product50S ribosomal protein L22 
Protein accessionYP_485916 
Protein GI86749420 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.823648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CCAAGCGCGA ACGGGTCCTC CCCGATAACG AGGCCAAGGC CGTTGCCCGG 
ATGCTTCGCG TCAGCCCGCA GAAGCTCAAC CTGGTGGCCC AGCTGATCCG TGGTCGCAAG
GCCGCGGCGG CGCTGGCCGA CCTGCAATTC TCGCGCAAGC GGATCGCGGT CGACGTCAAG
AAGTGCCTGG AATCGGCGAT CGCCAATGCC GAGAACAACC ACGACCTCGA CGTCGACGCG
CTCGTCGTCT CCGAGGCCCA TGTCGGCAAG GGCATCGTGA TGAAGCGCTT CTCGCCGCGC
GGCCGCGGCC GCTCGGGCCG TATTCTGAAA CCATTCGCGC AGCTGACGAT CGTCGTTCGT
CAGGTCGAAG CCGAAGCAAG CGCTTAA
 
Protein sequence
MSKPKRERVL PDNEAKAVAR MLRVSPQKLN LVAQLIRGRK AAAALADLQF SRKRIAVDVK 
KCLESAIANA ENNHDLDVDA LVVSEAHVGK GIVMKRFSPR GRGRSGRILK PFAQLTIVVR
QVEAEASA