Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2298 |
Symbol | rplB |
ID | 3909679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2655964 |
End bp | 2656800 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884195 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_485914 |
Protein GI | 86749418 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.749096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.220841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA AAAAATACAA TCCCACGACG CCGGGCCAGC GCCAGCTGGT GATGGTCGAT CGTTCGGCGC TCTACAAGGG CAAGCCGGTC AAGACGCTGA CCGAAGGCAA GCACTCGAAC GGCGGCCGCA ACAACACCGG CCGGATCACC GTGCGGTTCC GCGGCGGCGG CCACAAGAAG ACCTATCGTC TGGTCGACTT CAAGCGCACC AAGGTCGACG TTCCGGCCAA GGTCGAGCGC CTGGAATACG ATCCGAACCG CACCGCGTTC ATCGCGCTGA TCAAGTACGA GGACGGCGAG CAGGCCTACA TCCTGGCGCC GCAGCGCCTC GCGGTCGGCG ACACCGTGAT CGCCGGCGCC TATGTCGACG TCAAGCCGGG CAACGTCATG CCGCTCGGCA ACATGCCGAT CGGCACCATC GTGCACAATG TCGAGCTCAA GATCGGCAAG GGCGGGCAGA TCGCGCGTTC GGCCGGCACC TACGCTCAGC TCGTCGGCCG CGACCATGAC TACGTCATCA TGCGTCTGAA TTCAGGCGAG CAGCGCCTGG TCCACGGCCG CTGCACCGCC ACCATCGGTG CGGTGTCGAA CCCGGACCAC ATGAACATCT CGATCGGCAA GGCCGGGCGT ACGCGCTGGC TCGGCTGGCG CCCGCACAAC CGCGGTGTCG TCATGAACCC GATCGACCAT CCGCACGGCG GCGGCGAAGG CCGCACCTCG GGCGGCCGTC ACCCGGTCAC TCCGTGGGGC AAGCCGACCA AGGGCAAGAA GACCCGCTCG AACAAGTCGA CCGACAAGTT CATTCTCATC AGCCGCCACA AGCGGAAGAA GAAGTAA
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Protein sequence | MALKKYNPTT PGQRQLVMVD RSALYKGKPV KTLTEGKHSN GGRNNTGRIT VRFRGGGHKK TYRLVDFKRT KVDVPAKVER LEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDTVIAGA YVDVKPGNVM PLGNMPIGTI VHNVELKIGK GGQIARSAGT YAQLVGRDHD YVIMRLNSGE QRLVHGRCTA TIGAVSNPDH MNISIGKAGR TRWLGWRPHN RGVVMNPIDH PHGGGEGRTS GGRHPVTPWG KPTKGKKTRS NKSTDKFILI SRHKRKKK
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