Gene RPB_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2298 
SymbolrplB 
ID3909679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2655964 
End bp2656800 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID637884195 
Product50S ribosomal protein L2 
Protein accessionYP_485914 
Protein GI86749418 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.749096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.220841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA AAAAATACAA TCCCACGACG CCGGGCCAGC GCCAGCTGGT GATGGTCGAT 
CGTTCGGCGC TCTACAAGGG CAAGCCGGTC AAGACGCTGA CCGAAGGCAA GCACTCGAAC
GGCGGCCGCA ACAACACCGG CCGGATCACC GTGCGGTTCC GCGGCGGCGG CCACAAGAAG
ACCTATCGTC TGGTCGACTT CAAGCGCACC AAGGTCGACG TTCCGGCCAA GGTCGAGCGC
CTGGAATACG ATCCGAACCG CACCGCGTTC ATCGCGCTGA TCAAGTACGA GGACGGCGAG
CAGGCCTACA TCCTGGCGCC GCAGCGCCTC GCGGTCGGCG ACACCGTGAT CGCCGGCGCC
TATGTCGACG TCAAGCCGGG CAACGTCATG CCGCTCGGCA ACATGCCGAT CGGCACCATC
GTGCACAATG TCGAGCTCAA GATCGGCAAG GGCGGGCAGA TCGCGCGTTC GGCCGGCACC
TACGCTCAGC TCGTCGGCCG CGACCATGAC TACGTCATCA TGCGTCTGAA TTCAGGCGAG
CAGCGCCTGG TCCACGGCCG CTGCACCGCC ACCATCGGTG CGGTGTCGAA CCCGGACCAC
ATGAACATCT CGATCGGCAA GGCCGGGCGT ACGCGCTGGC TCGGCTGGCG CCCGCACAAC
CGCGGTGTCG TCATGAACCC GATCGACCAT CCGCACGGCG GCGGCGAAGG CCGCACCTCG
GGCGGCCGTC ACCCGGTCAC TCCGTGGGGC AAGCCGACCA AGGGCAAGAA GACCCGCTCG
AACAAGTCGA CCGACAAGTT CATTCTCATC AGCCGCCACA AGCGGAAGAA GAAGTAA
 
Protein sequence
MALKKYNPTT PGQRQLVMVD RSALYKGKPV KTLTEGKHSN GGRNNTGRIT VRFRGGGHKK 
TYRLVDFKRT KVDVPAKVER LEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDTVIAGA
YVDVKPGNVM PLGNMPIGTI VHNVELKIGK GGQIARSAGT YAQLVGRDHD YVIMRLNSGE
QRLVHGRCTA TIGAVSNPDH MNISIGKAGR TRWLGWRPHN RGVVMNPIDH PHGGGEGRTS
GGRHPVTPWG KPTKGKKTRS NKSTDKFILI SRHKRKKK