Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2293 |
Symbol | |
ID | 3909674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2652673 |
End bp | 2653863 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637884190 |
Product | elongation factor Tu |
Protein accession | YP_485909 |
Protein GI | 86749413 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.404032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG CAAAATTCGA ACGTACCAAG CCGCATTGCA ATATCGGGAC GATCGGTCAC GTCGACCATG GCAAGACGTC GCTGACGGCG GCGATCACCA AGGTTCTGGC GGAGACGGGC GGCGCGACGT TCACGGCCTA CGACCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGC ATCACGATTT CGACGGCTCA CGTCGAATAC GAGACGACGA ACCGCCACTA CGCGCATGTC GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCGGC GCAGATGGAC GGCGGCATTC TGGTGGTGTC GGCGGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC CTGCTGGCGC GCCAGGTCGG CGTTCCGGCG CTGGTGGTGT TCCTGAACAA GTGCGACATG GTCGACGATC CGGAACTGCT CGAGCTGGTC GAGATGGAAG TGCGCGAGCT TCTGTCGAAG TACGACTTCC CGGGCGACGA CATTCCGATC ATCAAGGGCT CGGCGCTGGC CGCTCTGGAG AACTCGGATC AGAAGCTCGG CCACGACGCG ATCCTGGAGC TGATGAAGGC GGTCGACGCC TACATTCCGC AGCCGGAGCG CCCGATCGAC CAGCCGTTCC TGATGCCGGT CGAAGACGTG TTCTCGATCT CGGGCCGCGG CACGGTGGTG ACCGGCCGCG TCGAGCGCGG CATCGTCAAG GTCGGCGAGG AAATCGAGAT CGTCGGCATC CGCGACACCC AGAAGACGAC CTGCACGGGC GTCGAAATGT TCCGCAAGCT GCTCGACCAG GGCCAGGCCG GCGACAACAT CGGCTGCCTG CTGCGCGGCA CCAAGCGCGA AGACGTCGAG CGCGGCCAGG TGCTGTGCAA GCCGGGTTCG GTGAAGCCGC ACACCAAGTT CAAGGCCGAG GCCTACATCC TGACCAAGGA AGAGGGCGGC CGTCACACCC CGTTCTTCAC CAACTATCGT CCGCAGTTCT ACTTCCGCAC CACCGACGTC ACCGGCGTCG TGCATCTGCC GGAAGGCACC GAGATGGTGA TGCCGGGCGA CAACATCGCC ATGGAAGTGC ACCTGATCGT GCCGATCGCG ATGGAAGAAA AGCTGCGCTT CGCCATCCGC GAAGGCGGCC GCACCGTCGG CGCCGGCGTG GTGGCCTCGA TCATCGAGTA A
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Protein sequence | MAKAKFERTK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATFTAYDQI DKAPEEKARG ITISTAHVEY ETTNRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSAAD GPMPQTREHI LLARQVGVPA LVVFLNKCDM VDDPELLELV EMEVRELLSK YDFPGDDIPI IKGSALAALE NSDQKLGHDA ILELMKAVDA YIPQPERPID QPFLMPVEDV FSISGRGTVV TGRVERGIVK VGEEIEIVGI RDTQKTTCTG VEMFRKLLDQ GQAGDNIGCL LRGTKREDVE RGQVLCKPGS VKPHTKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVHLPEGT EMVMPGDNIA MEVHLIVPIA MEEKLRFAIR EGGRTVGAGV VASIIE
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