| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2288 |
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| Symbol | |
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| ID | 3909669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2645362 |
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| End bp | 2647476 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884185 |
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| Product | ABC transporter related |
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| Protein accession | YP_485904 |
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| Protein GI | 86749408 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.418994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.773085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA AGCCGCCTGC CAAGCCACCG ACCGATCCGG CCGCCGCGCC GACGGCTGAT
CAATCCGCCG TTCCCGACGC GAAACCCGGC GAGGGCGATG CCGCCGCGTC GCCGCTCGAC
GAGAAATTCG CGATGCCGGT CGGCAAGACC GCCGCCGTGG TTCCCGGCAC CAAGCCGCCG
GTGAAACAGC TCGTTCAGGA CAAGACGCCG CCGGCGCCGA AGGCCGCGGC GGACGACGAC
GACGACGAAG AAGACGACGA AGACGGCGAG GGGGAGGACG ACGACGAGGA CGACGAGGAA
CTCGTCGTCT TCACCGCGCG CGAGGCCGCC GGCGCGCTCG CCACCATTGC GCGGTTCGTC
CGGCCGATCC TGCCGAACTA CAGGAAGATG GTCGCGATCG TGGTGTTCGG CGTTCTCGTC
GAGACGCTGT TCAACGTCAT CATGCCGCTC AGCCTGAAGT TCCTGATCGA CGATGCGCTC
GGCGAGGAGG ACTTCCAGGA ACTCTACAAG ATTCTGTCGA TCCTCGCGGT CGCCGGCGTG
ATCACCTCGA TCGTGGCGAT CTGGTACGAG CGCTGGGACG CGCGGCTCGC CGCGTCGGTC
ATCAGCGACG TGCGCACCCG GCTGTTCGAC CACGTCCAGC GGCTGCCCGC CGGCTACTTC
GCCCGCACCA AGCGCGGCGA GACGCTGTCG CGTTTCTCGA TCGACATGGC GGCGTTCGAG
AACGTGGTCG AGATCTTCGC CAACACCGCG CTGCTGCCGC TGCTCGAACT GGTGGCCGGC
ATCATCCTGA TGCTGTTCCT GAACTGGCAG CTCGCCGTGG TCGCGCTCCT GATCTTCCCG
ATCACGCTGA TCGGGCCGCG CATCCTGACG CCGAAGGCGG TGAAGGCCAA TTACGAGCAG
AAGGTCCAGG AGGCCGGGCT GCTCGGCATG GTGCAGGAGA ACGTCGGCGC GCAGGCCGTG
GTCAAGGCAT TCAGCCTGCA GCGCAAGATG TTCGGCTTCT TTTCGCTGCG CAACAACACG
ACACGGAACA AGATCGCCGA GGCGATCTTC CTGCGCACGA TGGTCGAGCG CTCGGTCACC
GTCGCGGTGC TGCTGCTGCA CATCGTGGTG CTGGCGATCG GCGCCTATCT GGCGACCAAG
GGCCAGATCA CGGTCGGCAC CTTCGTCACC TTCGAGAGCG CGTTCTGGGA GGTGTCTTAC
AACATCGCGC ATCTGATGCA GTTCATCCCG GTCGCGATCC AGGCCGCCGC CGCGGTCCGC
CACATGGAGG AGATGCTCGA CGAGCCGACC CCGATCGCCG ACCGGCCGGG CGCCGCCGAA
TTGCCGCGCA TCACCGACAA CATCGCCTTC GAGCGGGTGA CGTTCGGCTA CGAGGGCGCG
GAGCGGCCGG TGCTCGACAA TCTCAGCCTC AGGCTGCAGG CCGGCAAGAC CATCGCCATC
GTCGGCCCGA GCGGCTCCGG CAAGAGCACG CTGCTCAACC TGATCCTGCG GCTGTATCAG
CCCGACGAAG GGCGCGTCAC CGTCGACGGC GTCGACGTCC GCAAGGTCAC GATGGACTCG
CTGCGGCAGA GCATGGCCGT GGTGTTCCAG GACAACATGC TGTTCAACAT GACGATCCGC
GAGAACATCC GGCTCGGCAA GGAGGGCGCC ACCGACGCCG AGGTCGTCGC GGCGGCGAAG
AAGGCGGAGA TCCACCGCTA CATCATGAGC CTGCCGGACA AATACGACAC CCAGGTCGGC
GAGCGCGGCG ATACGCTGTC CGGCGGCCAG CGCCAGCGCC TGGCGATCGC CCGCGCCATC
GTGCGCGACC CGGCGGTGCT GCTGCTCGAC GAGGCGACCT CGGCGCTCGA CCAGACCACC
GAAGCGGCGA TCAACAAGAC GCTGCTGAAG CTGGCGCGCG GCCGCACCAT GATCTTCTCG
ACCCACCGGC TCGCCTCGGT GGTCGAGATG GACGAGATCA TCGTCATCTC CAACGGCCAG
GCGATCGAGC GCGGCTCGCA CAAGGAACTG CTGGCCAAGG ACGGCGTCTA CCGCAAGCTG
TGGGACGACC AGACCCACGG CCGTCACGGC AGCCGCAATG ACGACGATGA TGATGAAGAG
GACGACGACG AGTGA
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| Protein sequence | MARKPPAKPP TDPAAAPTAD QSAVPDAKPG EGDAAASPLD EKFAMPVGKT AAVVPGTKPP
VKQLVQDKTP PAPKAAADDD DDEEDDEDGE GEDDDEDDEE LVVFTAREAA GALATIARFV
RPILPNYRKM VAIVVFGVLV ETLFNVIMPL SLKFLIDDAL GEEDFQELYK ILSILAVAGV
ITSIVAIWYE RWDARLAASV ISDVRTRLFD HVQRLPAGYF ARTKRGETLS RFSIDMAAFE
NVVEIFANTA LLPLLELVAG IILMLFLNWQ LAVVALLIFP ITLIGPRILT PKAVKANYEQ
KVQEAGLLGM VQENVGAQAV VKAFSLQRKM FGFFSLRNNT TRNKIAEAIF LRTMVERSVT
VAVLLLHIVV LAIGAYLATK GQITVGTFVT FESAFWEVSY NIAHLMQFIP VAIQAAAAVR
HMEEMLDEPT PIADRPGAAE LPRITDNIAF ERVTFGYEGA ERPVLDNLSL RLQAGKTIAI
VGPSGSGKST LLNLILRLYQ PDEGRVTVDG VDVRKVTMDS LRQSMAVVFQ DNMLFNMTIR
ENIRLGKEGA TDAEVVAAAK KAEIHRYIMS LPDKYDTQVG ERGDTLSGGQ RQRLAIARAI
VRDPAVLLLD EATSALDQTT EAAINKTLLK LARGRTMIFS THRLASVVEM DEIIVISNGQ
AIERGSHKEL LAKDGVYRKL WDDQTHGRHG SRNDDDDDEE DDDE
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