| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2279 |
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| Symbol | |
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| ID | 3909660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2627788 |
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| End bp | 2628735 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884176 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_485895 |
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| Protein GI | 86749399 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.257995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.879431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACA AGGTTCTGGT GTTTTCGCGG TTCGCGAAGT CGATGCTGAC GCGGTTCGGC
GAGCGGTTCG AACTGCTCGA GACCGGCGGC AAGCCGGCCG ACGAAGTCTT CAGCGCGACC
GAACTCGCCG GCGTTCGCGC GCTGCTGACC ATGGGCGCGC AGCCGCTCGG CCGCGACACG
ATGGATCTGT TGCCGTCGCT CGGCGCGATC GTCTGCTACG GCACCGGCTA TGACGGAGTC
GACCTCGACG CCGCCGCCGA ACGCAACATC CTGATCGGCA ACTCGCCGGC GGCGAATGCC
TCGGCGGTCG CCGATCTGGC GATGACGCTG CTGCTCGGGC TGATGCGACG GGTGATTCCG
GCGGACGCTT ACTTACGCAG CGGCGGCTGG TCGGGAGCGA GGCCGTCGCC GCTGCTCAAG
CCACCGCGCG GCCTGACCGG CGCCAAAGTC GGCGTCTACG GCATGGGCGA GATCGGCCGC
AAGATCGCGG CGCGGGTGGC GTCGTTCGAG ACCGAGGTCG CCTATCACAG CCGCAGCCGT
CACGACGTGC CGTATCGCTA TGTCGGGAGC TTAAGCGAAC TGGTCGACTG GTGCGACGTG
CTGCTGATCG CGGTCCGCGC CGGCCCGGAT ACGCAGCGCA TCATCGATGC GGAGATGTTG
AAGCGGCTCG GCAAGGACGG CGTGGTGGTC AACATCTCGC GCGGCTCGGT GATCGACCAG
CCGGCGCTGA TCGCGGCACT GGCCGACAAC ACCATCGCCG GCGCCGGGCT CGACGTGTTC
GAACAGGAGC CTTACGTGCC GGATGCGCTC AGCGAGTTCC CGCACGTGGT GCTGACGCCG
CATATCGGCG GTCACACCCT CGATGCGCAT GTCGCGATGC AGGATTGCGT GATCGCCAAC
CTCACAGCTT ACTTTGCAGG CAGGCCGCTG CCTTATCCGG TGGCGTAG
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| Protein sequence | MTDKVLVFSR FAKSMLTRFG ERFELLETGG KPADEVFSAT ELAGVRALLT MGAQPLGRDT
MDLLPSLGAI VCYGTGYDGV DLDAAAERNI LIGNSPAANA SAVADLAMTL LLGLMRRVIP
ADAYLRSGGW SGARPSPLLK PPRGLTGAKV GVYGMGEIGR KIAARVASFE TEVAYHSRSR
HDVPYRYVGS LSELVDWCDV LLIAVRAGPD TQRIIDAEML KRLGKDGVVV NISRGSVIDQ
PALIAALADN TIAGAGLDVF EQEPYVPDAL SEFPHVVLTP HIGGHTLDAH VAMQDCVIAN
LTAYFAGRPL PYPVA
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