| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2278 |
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| Symbol | rplA |
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| ID | 3909659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2626987 |
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| End bp | 2627676 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884175 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_485894 |
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| Protein GI | 86749398 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.360769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG GTAAGCGTCT GAAGAAGGCT CGTGAAGGCA TCGATCGCAC CAAGCTGTAT
CCGCTCGACG AAGCGGTGAA GATGGTCAAG GAGCGTGCCG TCTCGAAGTT CGACGAAACC
ATCGAGGTCG CGCTCAATCT CGGCGTCGAT CCGCGTCACG CCGACCAGAT GGTCCGCGGC
GTGGTGATGC TGCCGAACGG CACCGGCCGC ACCGTGCGCG TCGGCGTGTT CGCGCGCGGC
GCCAAGGCGG ACGAAGCCAA GGCGGCGGGT GCCGACGTCG TCGGCGCCGA GGATCTCGTC
GAGCAGGTCC AGGCCGGCAA CATCAACTTC GACCGCTGCA TCGCTACCCC CGACATGATG
CCGCTGGTCG GCCGTCTCGG TAAGGTGCTC GGTCCGCGCG GCATGATGCC GAACCCGAAG
ATCGGCACGG TGACGATGGA CGTCGCCGGC GCGGTCAAGG GCGCCAAGGG CGGCTCGGTC
GAGTTCCGCG TCGAGAAGGC CGGCATCGTC CAGGCCGGCG TCGGCAAGGC CTCGTTCAGC
GAAGAGAAGC TGGTCGAGAA CATCAAGGCG CTCGCGGACG CGGTGACCAA GGCCAAGCCG
ACCGGCGCCA AGGGCACCTA TATCCAGCGC GTCGCGGTGT CGTCGTCGAT GGGCCCGGGC
GTCAAGGTCG AGCCGGGTTC GGTTCACTAA
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| Protein sequence | MAIGKRLKKA REGIDRTKLY PLDEAVKMVK ERAVSKFDET IEVALNLGVD PRHADQMVRG
VVMLPNGTGR TVRVGVFARG AKADEAKAAG ADVVGAEDLV EQVQAGNINF DRCIATPDMM
PLVGRLGKVL GPRGMMPNPK IGTVTMDVAG AVKGAKGGSV EFRVEKAGIV QAGVGKASFS
EEKLVENIKA LADAVTKAKP TGAKGTYIQR VAVSSSMGPG VKVEPGSVH
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