Gene RPB_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2273 
Symbol 
ID3909654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2623768 
End bp2624532 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID637884170 
ProductABC transporter related 
Protein accessionYP_485889 
Protein GI86749393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.639311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.805195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT TGCTCGACGT GCAGCAATTG TCCAAATCGT TCGGCGGCCT GCGGGTCACC 
GACGACGTGT CGTTCACGCT GTCGAGCGGC GATCGCGTCG CGCTGATCGG CCCGAACGGC
GCCGGCAAGA CGACGCTGGT CAACCTGATC TCCGGCGATC TGCCGCCCTC CAGCGGGCGG
ATCCTGCTCG CCGGCGAGGA CGTCACCGCC GCGTCGATCC CCGAGCGGGT GCAGGGCGGA
CTGGTGCGGA CGTTCCAGGT CACGCGGTTG TTCACCAGTC TGACGGTGGC CGAGAACGTC
GCGCTCGCGG TGATGCAGCG TCGCGGGCTG ACCAAGCGGA TGTTCTCGTC GGTGATGGAG
TCGGCGGAGG TGCGCGACGA ATGGCAAGGC GTGCTGAGCC TGCTCGGCAT CGCCCACCTC
GCGGCCATGC CGGTGACCAA GCTGGCCTAC GGTCAGCAGC GGCTGCTGGA TCTGGCGATC
GGGCTCGCGA TGAAGCCACG GGTCCTGGTG CTCGATGAGC CTGCCGCCGG CGTGCCGCAC
GACGAGTCGC CGCGGATTCT CGAAGCCATC GCCAGGATGT CGCCGGAGAT CGCGATCCTG
ATGATCGAGC ACGACATGGA TCTGGTGTTC AAATTCGCCA AACGCGTGCT GGTGCTGGCG
AATGGCGCCC TGATTTTCGA GGGCACGCCG GCGGAAGTGA AGCAGAACGA CGCCGTCCGT
CAGGCCTATC TGGGAAGCTA TGCCGATGCC CGCAGCACGT CTTGA
 
Protein sequence
MTALLDVQQL SKSFGGLRVT DDVSFTLSSG DRVALIGPNG AGKTTLVNLI SGDLPPSSGR 
ILLAGEDVTA ASIPERVQGG LVRTFQVTRL FTSLTVAENV ALAVMQRRGL TKRMFSSVME
SAEVRDEWQG VLSLLGIAHL AAMPVTKLAY GQQRLLDLAI GLAMKPRVLV LDEPAAGVPH
DESPRILEAI ARMSPEIAIL MIEHDMDLVF KFAKRVLVLA NGALIFEGTP AEVKQNDAVR
QAYLGSYADA RSTS