| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2270 |
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| Symbol | |
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| ID | 3909651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2620555 |
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| End bp | 2621730 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884167 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_485886 |
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| Protein GI | 86749390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.733577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.60166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGGG GATTGCGATC TGTTTATGCA CTCGCGGCGG TCTCGTTGAT CGCCACCGGC
GCGCGCGCCG ACACCATCAA GGTCGGCGTC ATCGGCACGA TGTCCGGGCC CTATGCGCTG
TTCGGCAAGA ACTACAAGAT GGGCATCGAC GCTTGGGTCG CCGAGCACGG CAACAAGGTC
GCCGGGCACA CCGTCGAGTT CGTGTACCGC GACGAGGTCT CGCCGAATCC GGCGCAGTCG
AAGGCGCTGG CGCAGGAGCT GATCGTCAAG GAGAAGGTGC AGTATCTCGC CGGCCTGTAT
TTCACGCCGA ACGCGATGGC GGTGGCGCCG CTGTTGCAGG AGGCCAAGGT GCCGATGGTG
GTGATGAACG CGGCGACGTC GTCGATCACC GAGAAGAGCC CTTACATCGT CCGCACCTCG
TTCACGATGT TCCAGAACAC CGTGCCGGCG GCGAAGGTCG CCAAGCAGAA GGGTGCCACC
AAGGTCGCGA TCGCGGTCAG CGATTACGGT CCGGGCATCG ACGCCGAAAC CGCGTTCAAG
AAGACGTTCG AAGCCGAGGG TGGCAAGGTC GTCGAGGCGG TGCGGATGCC GCTCAGCACC
ACGGATTTCG GACCGATCAT GCAGCGGATC AAGAATTCCG GCGCCGACAT GATCTTCACG
TTCTTGCCGG CCGGGCCGCC GACGCTCGGC TTCGTCAAGG CCTATATCGA CAACGGGCTG
AAGGCGGGCG GCGTCAAGCT GATGTCGACC GGCGACGTCG TCACCGAGCC CGATCTGCCG
AACATCGGCG AAGCCGGCCT CGGCATCCTG TCGACCTATC ACTACGCGGT GTCGCACGAC
TCGCCGGAAA ACAAGGCCTT CCTGGCCCTG CTCCAGAAGG GCGGTGCCAA GCTCGACGAA
GTCACCATGA CGTCGGTCGC GGCCTATGAC GGCGCGCGGC TGATCTACAA GATGATCGAG
GCGACCTCCG GCAAGAGCGA TCCGGACAAG GCGATCGCGG CGGTCAAGGG CATGAAGTGG
GTGAGCCCGC GCGGCGAGGT GTCGATCGAT CCGGAGACCC GCCACATCAC GCAGAACGTC
TATCTGCGCG AGGTCGAGAA GGTCGACGGC AAGCTGATCA ACAGGGAGCT GGAAACCTTC
AAGGCGCAGC CCGACTGGGG CCTCGCCAAG CAGTGA
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| Protein sequence | MGWGLRSVYA LAAVSLIATG ARADTIKVGV IGTMSGPYAL FGKNYKMGID AWVAEHGNKV
AGHTVEFVYR DEVSPNPAQS KALAQELIVK EKVQYLAGLY FTPNAMAVAP LLQEAKVPMV
VMNAATSSIT EKSPYIVRTS FTMFQNTVPA AKVAKQKGAT KVAIAVSDYG PGIDAETAFK
KTFEAEGGKV VEAVRMPLST TDFGPIMQRI KNSGADMIFT FLPAGPPTLG FVKAYIDNGL
KAGGVKLMST GDVVTEPDLP NIGEAGLGIL STYHYAVSHD SPENKAFLAL LQKGGAKLDE
VTMTSVAAYD GARLIYKMIE ATSGKSDPDK AIAAVKGMKW VSPRGEVSID PETRHITQNV
YLREVEKVDG KLINRELETF KAQPDWGLAK Q
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