Gene RPB_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2265 
Symbol 
ID3909645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2613427 
End bp2614650 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID637884161 
Productbeta-lactamase 
Protein accessionYP_485881 
Protein GI86749385 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC ACGCCGCCGC CAAATCCGCC GCCGCCCCCC GGACGCCACC GCTTGCCGAG 
GCGAAGCCCG AGACCATCGG GCTGTCCCCG GCCCGCCTGC AGGCCATGTC GGACGCCTTC
AAGCGCGAGA TCGACAAGGG CAGCATCCCC GGCGTCACCG TTCTGGTGTC ACGCCGTGGT
CATATTGGCT GGTTCGAGGC ACTCGGCCGG CAGGCACCCG GGGCCGACGC GCCGATGCGC
CCCGACAGCC TGTTCCGGAT TTTCTCGATG ACCAAGCCGA TCGTCTCGAT CGGCATCATG
CAGCTCGTCG AGGACGGCCA TCTGCAGCTC GACGATCCGC TGCAGAAGTT CATTCCCGAA
TTCGAGAACA CCAGCGTCGG CGCGGTGCGC GACGGCAAGC TCGATCTGGT GCCGCTGGTA
CGGCCGATCA CGATTCAAGA CCTGCTGCGC CACACCTCGG GAATTACTTA CGACCACGTC
AGCGACGGCC CGATCCAGAA GATGTATCGC GAGTCGCGTA TCCGCAGCCG CAAGATCACC
AACGAGGAGC ACGCCGGCCT GATCGCCGCG ATGCCGCTGG TGTGCCAGCC CGGCGCGGCC
TGGAACTACA GCCGCTCCAC CGACATCCTT GGCCGCGTCG TCGAAGTGAT TTCCGGCAAG
ACGCTCGGCG CGTTCCTGAC CGAGCGTATT CTGGCCCCGC TGCAGATGGC CGAGACCGGC
TTCCACACCG GCGCCGAGAA CAAGGGCCGG CTCGCCGAGC CCTTCCCCAC CGATCCGTGG
ACCGGCGATC CGGTCGCGCT GTTCAACATG CTGGAGAAGC CGGCGATGGA ATCCGGCGGC
GGCGGGCTGG TATCGACGAC GATGGACTAC GCGCGGTTCT GCCAGATGCT GCTGAGTGGC
GGCTCGCTCG ACGGCACCCG CATCATCGGC CGCAAGACGC TGCAATTGAT GGCGAGTAAC
CACCTCGAGC CGCACATCCC GCCGGACAAC TACATCCTGC CGCCGGGCCA CGGTTTCGGC
CTCGGCTTCG CGGTGCGCAC CGAACCCGGC ATCGCGCCGT TCCCGGGCTC GGTCGGCCAG
TTCTACTGGA GCGGCATCGC CGGCACGTTC TTCTGGATCG ATCCGGCGGA AGACCTGTTC
GCGGTGTTCA TGTCGCAAGG GCCGGGCCAG CGCGAGTACT TCCGCACGCT GGTTCGGAAT
CTGGTGTACG CGGCGGTGGA GTAG
 
Protein sequence
MTAHAAAKSA AAPRTPPLAE AKPETIGLSP ARLQAMSDAF KREIDKGSIP GVTVLVSRRG 
HIGWFEALGR QAPGADAPMR PDSLFRIFSM TKPIVSIGIM QLVEDGHLQL DDPLQKFIPE
FENTSVGAVR DGKLDLVPLV RPITIQDLLR HTSGITYDHV SDGPIQKMYR ESRIRSRKIT
NEEHAGLIAA MPLVCQPGAA WNYSRSTDIL GRVVEVISGK TLGAFLTERI LAPLQMAETG
FHTGAENKGR LAEPFPTDPW TGDPVALFNM LEKPAMESGG GGLVSTTMDY ARFCQMLLSG
GSLDGTRIIG RKTLQLMASN HLEPHIPPDN YILPPGHGFG LGFAVRTEPG IAPFPGSVGQ
FYWSGIAGTF FWIDPAEDLF AVFMSQGPGQ REYFRTLVRN LVYAAVE