| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2254 |
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| Symbol | |
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| ID | 3909037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2600267 |
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| End bp | 2602468 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884149 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_485870 |
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| Protein GI | 86749374 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG ACACTCTCGA TCCGCCGCCG CCGACCACTG CGGCGACCGC CGAATCGAAG
CAGCCGCCGA AACCCGCGCC GGCCTACAAG ATCATCAACG AGACCGGCAA CGTACGCGAA
GGCTTGCCCT ACCCGCTCGG CGCCTGCTGG GATGGCGAAG GCACCAACTT CGCGCTGTTC
TCGGCAAACG CCACCAAGGT CGAGGTCTGC CTGTTCGACG GCGACACCGA GCGCCGGATC
GAGTTGCCCG AGTACACCGA CGAAGTCTTC CACGGCTACA TACCTGATAT CGGCCCCGGC
ACGTTCTACG GCTATCGTGT GCACGGCCCC TACGAGCCGG AGAACGGTCA CCGCTTCAAC
CCGAACAAGC TGCTGCTCGA CCCTTACGCA CGCGCGCACG CCGGCGAGCT GAAGTGGGAC
CCGGCGGTGT TCGGCTATCA GATGGAAACC TGCGACGACA CCACCTTCGA CGAACGCGAC
TCCGCGGCGT TCGTGCCGAA ATGCGTCGTC GTCGATCCGG GCTTCGACTG GAAGGGCGAG
CCCGGCCGCA AATTCGTGCC GTGGGATCAG ACCATCGTCT ACGAAACCCA CGTCAAGGGT
TTCACCAAGC TGCATCCGGA GGTGCCGGAA CATCTGCGCG GAACCTATGC CGGCTTCGGC
AGCCAGCCGG TGGTGGACTA CATCGCCGCA CTCGGCGTCA CCGCCGTCGA GCTGCTGCCG
ATCCACACCT TCGTCAACGA CAGCTATCTG CTCGACAAGA AGCTGGTGAA CTATTGGGGT
TACAACACCA TCGGCTTCTT CGCGCCCGAT CCGCGCTACG CGGCGGACGT GCCGAACAGC
CTGCGCGAAT TCAAGGAGAT GGTGGCGCGG CTGCACGACG TCGGCCTCGC GGTGATCCTC
GACGTCGTCT ACAACCACAC CGCCGAGGGC AACGAACTCG GCCCGACGCT GTCATTCAAA
GGCATCGACA ACGCCAGCTA CTATCGCCTG CTGCCGGAGC AGGAGCGCTA TTACATCAAC
GACACCGGCA CCGGCAACAC CGTCAACCTC ACGCATCCGC GCGTGATCCA GATGGTCACC
GACTCGCTTC GCTACTGGGC CGGCGAGATG CACATCGACG GATTCCGCTT CGATCTCGGC
ACCATCCTGG CCCGCGAGGT TCACGGCTTC GACGACCAGA GCGGGTTCCT CAAGGCGGTC
AATCAGGACC CGATGCTGAG CTCGGTGAAG CTGATCGCAG AACCGTGGGA TTGCGGACCA
GGCGGCTATC AGGTCGGTGG ATTTCCGCCC GGCTGGGCGG AATGGAACGA CAAGTTCCGT
GATACGATTC GCGACTACTG GCGCGGCGAC GCTTCGGTGT CGGCCCTCGC GCCACGTCTG
GCCGCCTCCG GCGACGTGTT CAATCGGCAG GGCCGCCGAG CCTGGGCCAG CGTCAACTTC
ATCACGGCGC ATGACGGCTT CACGCTCAAC GACTGGGCGA GCTACAACGA GAAGCACAAC
ATTGCCAACG GCGAGGACGG GAAGGACGGT CATTCCGACA ACCGGTCGTG GAATTGCGGC
GCCGAGGGAC CGACCGACGA CGAGGCGATC CTCGCGCTGC GCGAGCGCCA GAAGCGCAAC
ATGCTGGCGA CGCTGCTGCT GGCGCAAGGC ACCCCGATGC TGCTCGCCGG TGACGAATTC
GGTCGCACCC AGCAGGGTAA CAACAACGCC TATTGCCAGG ACAACGAGAT CTCCTGGGTG
CATTGGGACC ACGACGCAGC CGCGCAGGAT CTCCTGACCT TCACCAAACG GTTGATCGAA
CTGCGGCGGA CCTGTCCGAC GCTGCGACGC AGCCGTTTCC TGCAGGGCCA ATACGACGAG
GCGCTCGACG TCTGCGACGT CACCTGGATC AACGCCAATG GTGGTCCGAT GCAGACCGAG
CACTGGGAAG ACGGCAACGT GAAATGCTTC GGCATGTTGC TGGACGGCCG CGCGCAGAAG
ACCGGCATAC GCCGGCACGC AGAGGACGAC ACCGTGTTGC TGATCACCAA CGCCTTCGAC
GGCGTGGTCG ACTTCAACCT GCCCGAGGTT CCGCACGGCT CGAAATGGCA GTTGCTGATC
GACACCAATC TTCCGGACGG AGCCGCCGGC GAACAGTTCG CATGCGGAGC TGCGTATCAG
GTGACGGCGC GATCGGTCCT GCTGTTCGGA TTGGTGGAGT AG
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| Protein sequence | MTTDTLDPPP PTTAATAESK QPPKPAPAYK IINETGNVRE GLPYPLGACW DGEGTNFALF
SANATKVEVC LFDGDTERRI ELPEYTDEVF HGYIPDIGPG TFYGYRVHGP YEPENGHRFN
PNKLLLDPYA RAHAGELKWD PAVFGYQMET CDDTTFDERD SAAFVPKCVV VDPGFDWKGE
PGRKFVPWDQ TIVYETHVKG FTKLHPEVPE HLRGTYAGFG SQPVVDYIAA LGVTAVELLP
IHTFVNDSYL LDKKLVNYWG YNTIGFFAPD PRYAADVPNS LREFKEMVAR LHDVGLAVIL
DVVYNHTAEG NELGPTLSFK GIDNASYYRL LPEQERYYIN DTGTGNTVNL THPRVIQMVT
DSLRYWAGEM HIDGFRFDLG TILAREVHGF DDQSGFLKAV NQDPMLSSVK LIAEPWDCGP
GGYQVGGFPP GWAEWNDKFR DTIRDYWRGD ASVSALAPRL AASGDVFNRQ GRRAWASVNF
ITAHDGFTLN DWASYNEKHN IANGEDGKDG HSDNRSWNCG AEGPTDDEAI LALRERQKRN
MLATLLLAQG TPMLLAGDEF GRTQQGNNNA YCQDNEISWV HWDHDAAAQD LLTFTKRLIE
LRRTCPTLRR SRFLQGQYDE ALDVCDVTWI NANGGPMQTE HWEDGNVKCF GMLLDGRAQK
TGIRRHAEDD TVLLITNAFD GVVDFNLPEV PHGSKWQLLI DTNLPDGAAG EQFACGAAYQ
VTARSVLLFG LVE
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