| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2243 |
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| Symbol | |
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| ID | 3909026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2572670 |
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| End bp | 2574004 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884138 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_485859 |
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| Protein GI | 86749363 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA CCGATTTCGC CTTTTCCAAC GACGTCCGCG CAGCCGTCGA GCTACGCACG
CCGAAAACGG CGCGGATGTT GCTGTCTGCA TCTTTGGCGC TGTTCTTCAC CTTCTTGGCC
TGGGCGCATT TCGCCGTGCT CGACGAGGTC AAGCGCGGCA ACGGCAAGGT GGTGCCGTCG
CGGCAAACCC AAGTGGTCCA GTCGCTCGAA GGCGGCATCA TCGCCGAACT GCTGGTTCAA
GAAGGTGCGA TCGTCGACAA GGATCAGCCG CTGGCGCGCA TCGAGGACAC CAACTTCGCG
GCACAGTTCG GCGAGATCCG CGAACGTCGT GGCGCGATGG GGGCGCGTGT CCTGCGGCTC
GAGGCCGAGA CCGAGGGCCG CGCCAGCGTC GTGTTTCCCG CCGAACTGAT GCAGGTCGCG
CCGCGCGCGG TCGAAGCCGA GCGTCTGGTG TTCGAGGCGC ACAACCGCAA GTTGGCGCAG
GATATCGACG TCGTCCAGCA GCAGGAGATC CAGAAGACCA AGGAGATCGA CGAGCTGCGC
GCCAGCGAGA AACGCTTCTC CGAGACGCTG ACCCTGCTCA ACCGCGAGAT CGCGCTGACC
CGCAAGCTCT ACGATCAGAA GGTGGTGCCG GAGATCGAGA TGCTGCGAGC CGATCGGCAG
GCCACCGACA TGCGCGGCCA ACTCGCGGTG GTGCAGGCGA CCATCATCAA GACCCAGGCG
GCGGTTCAGG AGGCGCGGTC GCGCCGGCTC AACATCACCA CGGCGTTCCG CGCCCAGGCC
GAGGACGATC TCGCCAAATC CCGCGGCGAT CTCGCCGTGC TGGACGAGAA CATCAAGTCG
GCGAAGGATC GCGTCCGCCG CACCGAGCTG CGCTCGCCGG TGCATGGCGT CGTCAACAAG
CTGAATATCA CCACGATCGG TGCCGTCGTC GCCCCCGGCG CGAGTCTGAT GGAAATCGTG
CCGCTCGACG ACACGCTGCT GGTCGAAGGC CGCATCCGCC CGCAGGACAT CGCCTTCATT
CGCCCCGATC ACGAGGCGGT GGTGAAGCTG AGCGCCTACG ATTCATCGGT CTACGGATCG
CTGCACGGCC GCGTCGAGCG GATCAGCGCC GACACCATCA CCGACGAAAA GGGTGACAAG
AACGAGCGCG GCGAGACGTT TTACCGGGTG ATGGTGCGGA CCGAGAAGAA CCATCTCGGC
ACCAATGAAC AGCCGCTGCC GATCATTCCG GGCATGGTGG CCACGGTCGA GATTCTCACC
GGCAAGAAGT CGGTGCTGGA CTATCTGATC AAGCCGGCGC GCACCCTGCG AGACGAAGCG
CTCCGCGAAC GCTGA
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| Protein sequence | MAQTDFAFSN DVRAAVELRT PKTARMLLSA SLALFFTFLA WAHFAVLDEV KRGNGKVVPS
RQTQVVQSLE GGIIAELLVQ EGAIVDKDQP LARIEDTNFA AQFGEIRERR GAMGARVLRL
EAETEGRASV VFPAELMQVA PRAVEAERLV FEAHNRKLAQ DIDVVQQQEI QKTKEIDELR
ASEKRFSETL TLLNREIALT RKLYDQKVVP EIEMLRADRQ ATDMRGQLAV VQATIIKTQA
AVQEARSRRL NITTAFRAQA EDDLAKSRGD LAVLDENIKS AKDRVRRTEL RSPVHGVVNK
LNITTIGAVV APGASLMEIV PLDDTLLVEG RIRPQDIAFI RPDHEAVVKL SAYDSSVYGS
LHGRVERISA DTITDEKGDK NERGETFYRV MVRTEKNHLG TNEQPLPIIP GMVATVEILT
GKKSVLDYLI KPARTLRDEA LRER
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